Factsheet for Os09t0481700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0285800-01
Os06t0154500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	Os06t0154500-01	AT2G43790.1	24830428
AT4G26440.1	Os03t0285800-01	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35872	Sorghum	nucleus	65.72	71.36
Zm00001d006001_P006	Maize	nucleus	62.4	68.82
Zm00001d020881_P002	Maize	nucleus	62.88	67.57
HORVU5Hr1G072020.1	Barley	nucleus	68.4	64.05
TraesCS5A01G258100.1	Wheat	nucleus	68.09	63.66
TraesCS5D01G266300.1	Wheat	nucleus	67.77	63.27
TraesCS5B01G257300.1	Wheat	nucleus	67.77	63.18
Os08t0499300-01	Rice	nucleus	53.55	50.3
GSMUA_Achr5P23900_001	Banana	nucleus	36.33	40.71
GSMUA_Achr6P03500_001	Banana	nucleus	32.23	39.61
GSMUA_Achr11P...	Banana	nucleus	40.13	39.26
GSMUA_Achr5P04150_001	Banana	nucleus	38.7	38.7
GSMUA_Achr4P01600_001	Banana	nucleus	40.6	38.59
CDY32799	Canola	nucleus	36.49	38.44
CDY11947	Canola	nucleus	33.18	36.59
Bra028939.1-P	Field mustard	nucleus	25.75	36.3
CDY36788	Canola	nucleus	35.07	35.58
AT5G56270.1	Thale cress	nucleus	37.76	34.79
Bra002828.1-P	Field mustard	nucleus	36.97	34.77
CDY49388	Canola	nucleus	36.65	34.58
CDX94335	Canola	nucleus	24.33	29.96
Bra026438.1-P	Field mustard	nucleus	24.96	29.59
CDX89336	Canola	nucleus	24.8	29.4
CDY69527	Canola	nucleus	25.12	29.28
AT4G26440.1	Thale cress	nucleus	25.59	28.52
Os05t0343400-01	Rice	nucleus	21.8	28.34
Bra019105.1-P	Field mustard	nucleus	23.54	28.17
CDY42736	Canola	nucleus	23.54	28.17
VIT_19s0015g01870.t01	Wine grape	nucleus	30.49	25.87
Os01t0826400-01	Rice	extracellular	21.96	25.05
Os04t0471700-00	Rice	nucleus	39.34	24.95
KRH62550	Soybean	nucleus	29.07	24.18
Os05t0474800-01	Rice	nucleus	21.33	23.6
Os07t0583700-01	Rice	nucleus	22.91	23.46
Os07t0596900-00	Rice	nucleus	15.96	23.38
KRH56379	Soybean	nucleus	28.59	23.32
Os12t0507300-00	Rice	nucleus	14.69	23.31
Os03t0758950-01	Rice	nucleus, plastid	15.32	22.1
PGSC0003DMT400029328	Potato	nucleus	24.17	21.95
Solyc10g005680.1.1	Tomato	nucleus	23.38	21.05
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	9.48	16.09
Os08t0276200-01	Rice	cytosol, nucleus, plastid	4.42	7.65
Os03t0758900-01	Rice	plastid	1.11	1.73

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4347399	EMBL:AK065078	EMBL:AK103745	ProteinID:BAF25411.1
ProteinID:BAT08648.1	ProteinID:EEE69923.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os09g0481700	EnsemblPlants:Os09t0481700-01	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	UniProt:Q0J0V4	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI0000DD978E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015612220.1	RefSeq:XP_015612221.1	SEG:seg

Description

WRKY GENE 90SUSIBA2-like (WRKY transcription factor 80). (Os09t0481700-01);SUSIBA2-like (WRKY transcription factor 80). (Os09t0481700-02)

Coordinates

chr9:-:18496976..18501218

Molecular Weight (calculated)

68283.7 Da

IEP (calculated)

6.011

GRAVY (calculated)

-0.712

Length

633 amino acids

Sequence
(BLAST)

001: MASSSDHGSL MEDWMPPPTP SPRTLMSSFL NEDFVSGSFS NIFSDHESNK PQDQFERNRE LVDLSKEVPS QFARPAFQRD ASLDHSLVSP TQRSNSHGGL
101: AERRAARAGF SVPKIDTSRG GSSTVIRSPV AIPPGLSPTT LLESPVFLYN AMAQPSPTTG TLPFLMASNA KSTIPSATKM DEDCTFGNDT FSFQPHVGSR
201: RPNFSAAEKG PNACHQNQSL SNIHQRESSL QSSFTAVKDI TDEKNIKTKT SDSMFGDNHS SDEQDDETNQ NGENSMPPPN HRSGVPLSHT NDPEVNVLEN
301: RGSQTCHNSA SLWDNAKNDC LQDVQSEVIE TRTAACLPVS TNCDTSIMES QDAVDVSSTL SNEEDDRATH GTASIECNGD GDETDSKRRK LDALTAATAA
401: ITTTSNIDMG AAASRGVREP RVVVQTTSEV DILDDGYRWR KYGQKVVKGN PNPRSYYKCT HQGCSVRKHV ERASHDLKSV ITTYEGKHNH EVPAARNSGH
501: GSSGSGNAPS APQSNGSQRR QEQGQASFSQ FGGAAPFSSF VLPPRNQFGP SASNFPFGMV PPGMAIPMPS LGSLAPAKMA GHPSTMQGYQ GLMIPEGEMK
601: TEPMSQLGFP AVNQSSSSFQ QMMNRPPSFG PQM

Best Arabidopsis Sequence Match ( AT4G26440.1 )
(BLAST)

001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI

Arabidopsis Description

WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.