Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89336 | Canola | nucleus | 88.13 | 84.83 |
| CDY69527 | Canola | nucleus | 74.71 | 70.72 |
| CDY42736 | Canola | nucleus | 71.21 | 69.19 |
| AT4G26440.1 | Thale cress | nucleus | 71.79 | 64.96 |
| CDY05016 | Canola | nucleus | 25.29 | 40.75 |
| CDY14055 | Canola | nucleus | 24.51 | 39.5 |
| CDY11947 | Canola | nucleus | 43.58 | 39.02 |
| CDY36788 | Canola | nucleus | 45.53 | 37.5 |
| GSMUA_Achr5P23900_001 | Banana | nucleus | 39.69 | 36.11 |
| CDY29685 | Canola | nucleus | 24.51 | 36.0 |
| CDX97834 | Canola | nucleus | 24.9 | 35.46 |
| CDY10720 | Canola | nucleus | 25.29 | 34.85 |
| CDY49388 | Canola | nucleus | 45.33 | 34.72 |
| CDY24017 | Canola | nucleus | 25.1 | 34.13 |
| CDX84848 | Canola | nucleus | 24.9 | 33.86 |
| GSMUA_Achr6P03500_001 | Banana | nucleus | 33.66 | 33.59 |
| CDX91470 | Canola | nucleus, plastid | 30.16 | 32.56 |
| CDY65564 | Canola | nucleus, plastid | 29.77 | 32.48 |
| HORVU0Hr1G004890.10 | Barley | nucleus | 37.74 | 32.23 |
| CDX98138 | Canola | nucleus | 28.6 | 32.17 |
| CDY36419 | Canola | nucleus | 28.4 | 32.09 |
| CDY07729 | Canola | nucleus | 29.38 | 31.92 |
| CDY69941 | Canola | nucleus, plastid | 29.57 | 31.87 |
| CDY53941 | Canola | nucleus | 27.24 | 31.82 |
| CDY18383 | Canola | nucleus, plastid | 29.77 | 31.81 |
| CDY72350 | Canola | nucleus | 8.95 | 31.72 |
| GSMUA_Achr11P... | Banana | nucleus | 39.69 | 31.53 |
| CDY70490 | Canola | nucleus | 31.71 | 31.47 |
| CDY62213 | Canola | nucleus | 28.4 | 31.47 |
| HORVU7Hr1G049130.1 | Barley | nucleus, plastid | 14.98 | 31.43 |
| CDY02051 | Canola | nucleus | 16.93 | 31.41 |
| CDY14459 | Canola | nucleus, plastid | 29.57 | 31.02 |
| CDY33788 | Canola | nucleus | 26.46 | 30.77 |
| GSMUA_Achr5P04150_001 | Banana | nucleus | 37.74 | 30.65 |
| CDY32799 | Canola | nucleus | 35.6 | 30.45 |
| CDX74281 | Canola | nucleus | 26.65 | 30.38 |
| CDX96873 | Canola | nucleus | 27.43 | 30.26 |
| CDY45169 | Canola | nucleus | 28.6 | 30.25 |
| CDX89317 | Canola | nucleus | 31.32 | 30.15 |
| CDY03003 | Canola | nucleus | 28.6 | 30.06 |
| CDX94303 | Canola | nucleus | 30.93 | 29.89 |
| GSMUA_Achr4P01600_001 | Banana | nucleus | 38.33 | 29.58 |
| HORVU5Hr1G072020.1 | Barley | nucleus | 38.72 | 29.44 |
| TraesCS5A01G258100.1 | Wheat | nucleus | 38.72 | 29.39 |
| TraesCS5D01G266300.1 | Wheat | nucleus | 38.72 | 29.35 |
| CDY16122 | Canola | nucleus | 25.49 | 29.24 |
| CDY37191 | Canola | nucleus | 27.63 | 29.22 |
| CDX92808 | Canola | nucleus | 29.77 | 29.2 |
| Zm00001d025669_P001 | Maize | nucleus | 37.35 | 28.96 |
| CDY46692 | Canola | nucleus | 29.57 | 28.95 |
| Os08t0499300-01 | Rice | nucleus | 37.94 | 28.93 |
| TraesCS5B01G257300.1 | Wheat | nucleus | 38.13 | 28.87 |
| CDX97359 | Canola | nucleus | 30.16 | 28.86 |
| CDX74976 | Canola | nucleus | 22.18 | 28.64 |
| CDY14304 | Canola | nucleus | 30.35 | 28.52 |
| Solyc07g066220.2.1 | Tomato | nucleus | 40.86 | 28.42 |
| PGSC0003DMT400056952 | Potato | nucleus | 41.25 | 28.34 |
| VIT_19s0015g01870.t01 | Wine grape | nucleus | 41.05 | 28.28 |
| CDX93073 | Canola | nucleus | 20.23 | 28.26 |
| TraesCS7D01G239800.2 | Wheat | nucleus | 34.44 | 28.18 |
| OQU80981 | Sorghum | nucleus | 37.35 | 28.03 |
| TraesCS7B01G136400.2 | Wheat | nucleus, plastid | 34.44 | 27.96 |
| TraesCS2A01G330500.1 | Wheat | nucleus | 39.88 | 27.89 |
| CDX91348 | Canola | nucleus | 21.79 | 27.86 |
| Zm00001d003331_P001 | Maize | nucleus | 37.74 | 27.6 |
| CDY48650 | Canola | nucleus, plastid | 23.74 | 27.54 |
| TraesCS2B01G351600.1 | Wheat | nucleus | 39.11 | 27.53 |
| TraesCS2D01G332300.1 | Wheat | nucleus | 39.3 | 27.48 |
| Zm00001d052847_P001 | Maize | nucleus | 38.91 | 27.43 |
| CDY62292 | Canola | nucleus | 11.09 | 27.4 |
| TraesCS7A01G240800.1 | Wheat | nucleus | 34.44 | 27.19 |
| KXG26525 | Sorghum | nucleus | 39.11 | 27.16 |
| KRH62550 | Soybean | nucleus | 39.88 | 26.94 |
| KRH56379 | Soybean | nucleus | 39.3 | 26.03 |
| KXG35872 | Sorghum | nucleus | 28.79 | 25.39 |
| Zm00001d020881_P002 | Maize | nucleus | 28.79 | 25.13 |
| Zm00001d006001_P006 | Maize | nucleus | 27.43 | 24.56 |
| Os09t0481700-01 | Rice | nucleus | 29.96 | 24.33 |
| CDY50038 | Canola | nucleus | 20.62 | 24.31 |
| CDY36463 | Canola | nucleus | 18.29 | 23.56 |
| CDY62293 | Canola | nucleus | 9.14 | 23.15 |
| CDY08253 | Canola | nucleus | 18.68 | 23.08 |
| CDY26094 | Canola | nucleus | 18.68 | 23.08 |
| CDX79729 | Canola | nucleus | 14.2 | 22.67 |
| CDY46769 | Canola | nucleus | 14.2 | 22.6 |
| CDY46768 | Canola | nucleus | 14.2 | 22.6 |
| CDY47546 | Canola | nucleus | 16.93 | 22.14 |
| CDY47543 | Canola | nucleus | 12.06 | 21.91 |
| CDY10548 | Canola | nucleus | 18.29 | 21.81 |
| CDY59057 | Canola | nucleus | 18.29 | 21.03 |
| CDY23265 | Canola | nucleus | 18.09 | 20.35 |
| Os04t0471700-00 | Rice | nucleus | 38.52 | 19.84 |
| CDY67588 | Canola | nucleus | 19.84 | 19.77 |
| CDY54360 | Canola | nucleus | 19.65 | 18.17 |
| CDY13396 | Canola | nucleus | 17.9 | 17.33 |
| CDY52777 | Canola | nucleus, plastid | 5.06 | 15.2 |
| CDX72277 | Canola | nucleus | 18.48 | 12.96 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DYA5 | EnsemblPlants:CDX94335 | ProteinID:CDX94335 | ProteinID:CDX94335.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00157444001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF86 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE35C7 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g18490D
Coordinates
chrLK031881:+:301037..302871
Molecular Weight (calculated)
56385.4 Da
IEP (calculated)
6.464
GRAVY (calculated)
-0.707
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGFSDNFAV MGEWVDCSIN HKKRSKAELD RETFLEEDVE NKDLLQTSFQ ERSSYSGGGL SERIAARAGF NIPNINIESN LWSLNISSPG VSPATLLESP
101: VFLSNPLLSP TTGKLSSLPS DHKAKDEFFD PTLIGLEHDD SQPHERTHDS GSRNSMASSG APADDGYNWR KYGQKLVKGS EYPRSYYKCT HPNCEVKKKV
201: ERSREGHITE IIYAKTHNHP KPPLNRRSGI GSSGTCNDMQ IGGTEQQESF AGTNENIEWT SPVRNYGSMQ VQSGTQFGYG DAAFFNDEED RTSHMSVSMG
301: YDGEADESEP KRRKLEACAA RGTRAPKVVV KTTTDVDILE DGYRWRKYGQ KVVKGNPNPR SYYKCTATGC IVTKHVERAS DDLTSVLTTY IGKHTHEVPA
401: ARNSSSHMSS GSSGTIQGGL PTQTQNYHVH YPEPHSRSEG LVTANSSLYD FQPSMRPPWA GFSVYGGETE LLGLSISGLA IGQERFSMPA TGDPAGLMLQ
501: LPAVGTNTSS LPQI
101: VFLSNPLLSP TTGKLSSLPS DHKAKDEFFD PTLIGLEHDD SQPHERTHDS GSRNSMASSG APADDGYNWR KYGQKLVKGS EYPRSYYKCT HPNCEVKKKV
201: ERSREGHITE IIYAKTHNHP KPPLNRRSGI GSSGTCNDMQ IGGTEQQESF AGTNENIEWT SPVRNYGSMQ VQSGTQFGYG DAAFFNDEED RTSHMSVSMG
301: YDGEADESEP KRRKLEACAA RGTRAPKVVV KTTTDVDILE DGYRWRKYGQ KVVKGNPNPR SYYKCTATGC IVTKHVERAS DDLTSVLTTY IGKHTHEVPA
401: ARNSSSHMSS GSSGTIQGGL PTQTQNYHVH YPEPHSRSEG LVTANSSLYD FQPSMRPPWA GFSVYGGETE LLGLSISGLA IGQERFSMPA TGDPAGLMLQ
501: LPAVGTNTSS LPQI
001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
Arabidopsis Description
WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.