Factsheet for TraesCS2A01G330500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G106400.1
TraesCS4B01G197800.1
TraesCS4D01G198600.1
TraesCS7A01G111300.1
TraesCS7B01G009200.1
TraesCS7D01G106400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	TraesCS7A01G111300.1	AT2G43790.1	24830428
AT4G26440.1	TraesCS7B01G009200.1	AT2G43790.1	24830428
AT4G26440.1	TraesCS7D01G106400.1	AT2G43790.1	24830428
AT4G26440.1	TraesCS4A01G106400.1	AT3G45640.1	24830428
AT4G26440.1	TraesCS4B01G197800.1	AT3G45640.1	24830428
AT4G26440.1	TraesCS4D01G198600.1	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G351600.1	Wheat	nucleus	95.92	96.58
TraesCS2D01G332300.1	Wheat	nucleus	95.92	95.92
HORVU0Hr1G004890.10	Barley	nucleus	76.6	93.52
Zm00001d025669_P001	Maize	nucleus	57.55	63.8
Zm00001d003331_P001	Maize	nucleus	59.86	62.59
KXG26525	Sorghum	nucleus	60.95	60.54
GSMUA_Achr5P23900_001	Banana	nucleus	36.6	47.61
GSMUA_Achr6P03500_001	Banana	nucleus	33.2	47.38
Bra028939.1-P	Field mustard	nucleus	28.3	46.33
GSMUA_Achr5P04150_001	Banana	nucleus	37.82	43.92
GSMUA_Achr11P...	Banana	nucleus	38.64	43.89
GSMUA_Achr4P01600_001	Banana	nucleus	39.32	43.39
CDY11947	Canola	nucleus	33.61	43.03
CDY36788	Canola	nucleus	35.65	41.99
Os04t0471700-00	Rice	nucleus	55.65	40.98
TraesCS5A01G258100.1	Wheat	nucleus	37.41	40.62
Bra002828.1-P	Field mustard	nucleus	36.87	40.27
CDY49388	Canola	nucleus	36.73	40.24
CDX94335	Canola	nucleus	27.89	39.88
CDX89336	Canola	nucleus	28.84	39.7
Bra026438.1-P	Field mustard	nucleus	28.84	39.7
AT5G56270.1	Thale cress	nucleus	37.01	39.59
CDY69527	Canola	nucleus	28.3	38.31
Bra019105.1-P	Field mustard	nucleus	27.48	38.19
CDY42736	Canola	nucleus	27.48	38.19
AT4G26440.1	Thale cress	nucleus	28.98	37.5
TraesCS7A01G240800.1	Wheat	nucleus	32.93	37.17
TraesCS1A01G070400.1	Wheat	nucleus	22.18	37.05
CDY32799	Canola	nucleus	30.07	36.77
TraesCS3A01G347500.1	Wheat	nucleus	24.9	32.56
VIT_19s0015g01870.t01	Wine grape	nucleus	32.79	32.31
TraesCS1A01G298600.1	Wheat	nucleus, plastid	22.18	32.28
KRH62550	Soybean	nucleus	33.06	31.93
TraesCS5A01G104900.1	Wheat	nucleus	21.36	31.59
KRH56379	Soybean	nucleus	32.52	30.8
TraesCS5A01G396800.1	Wheat	nucleus	17.69	30.66
TraesCS4A01G162500.1	Wheat	nucleus	19.86	29.92
TraesCS2A01G189700.1	Wheat	nucleus	24.76	29.74
TraesCS2A01G182700.1	Wheat	nucleus	16.73	26.45
PGSC0003DMT400029328	Potato	nucleus	24.76	26.11
Solyc10g005680.1.1	Tomato	nucleus	23.81	24.89
TraesCS7A01G294800.2	Wheat	nucleus	17.41	24.52

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2A01G330500	EnsemblPlants:TraesCS2A01G330500.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:562980099..562985609

Molecular Weight (calculated)

77484.7 Da

IEP (calculated)

6.863

GRAVY (calculated)

-0.702

Length

735 amino acids

Sequence
(BLAST)

001: MDGHTHLAVE WKDQSPGADC SMLPSFLTDP FPADPLVEDC DGGNDGSEGA GFERHGLSVA VGSPQEEGKP ATPHFGQRSS SSSSLSERMQ ARAGFSVAKL
101: SMPGSEYSGA QSPYLTIPPG LSPASLLESP VFLSNAMGQS SPTTGKLLML GDTNNNNNTR LEPPSIEDRP GAFSFKPLDL KSSQYTAEGK KGSLPNSQHP
201: SAPSRDVPVK TETNIQTTTR GAIPPGHLNQ AQFNNGQDLM KCSYHDCNNK RNRLAADRTT AGGDNNDGPP VTAADSEAAK GDYPAAVATA APAEDGYSWR
301: KYGQKQVKHS EYPRSYYKCT HPSCQVKKKV ERSHEGHVTE IIYKGTHNHP RPAAQGRRPA GGAQVHPFND AQMDAPADNN NNGYGNAGGS QPNAEARSLW
401: HAGVAVQDWR GDGLEATSSP SVPGELCDSS ASMQVHDGAA RFESPEGGVD VTSAVSDEVD GDDRVAHGSM SQGQGAADTT EGDELESKRR KLESCAIDMS
501: TASRAVREPR VVIQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTH PGCSVRKHVE RASHDLKSVI TTYEGKHNHE VPAARNGGHG SSAASGGTGA
601: SQLSHARRAE PPSVQDGLMR LGGCGAPFGL PPRDPLGPMS NYPYSLGGGH ASLPSLPMPS GLGAVEGLKL PMLSPSLHSV FRQRQAMETA AGFRVPKGEV
701: KDEAAGAGAG AGGGAAAAAA YPQTMMSRLP LGHRM

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.