Factsheet for TraesCS5A01G396800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G406500.1	Wheat	nucleus	93.87	94.76
TraesCS5B01G401800.1	Wheat	nucleus	92.69	93.35
EER93417	Sorghum	nucleus	59.43	59.43
Zm00001d034084_P001	Maize	nucleus	58.73	58.45
TraesCS1A01G070400.1	Wheat	nucleus	30.19	29.09
TraesCS5A01G104900.1	Wheat	nucleus	32.78	27.97
TraesCS4A01G162500.1	Wheat	nucleus	30.9	26.84
TraesCS1A01G298600.1	Wheat	nucleus, plastid	29.25	24.55
TraesCS2A01G182700.1	Wheat	nucleus	26.42	24.09
TraesCS3A01G347500.1	Wheat	nucleus	30.9	23.31
TraesCS5A01G258100.1	Wheat	nucleus	32.31	20.24
TraesCS7A01G240800.1	Wheat	nucleus	29.72	19.35
TraesCS2A01G189700.1	Wheat	nucleus	27.36	18.95
TraesCS2A01G330500.1	Wheat	nucleus	30.66	17.69
TraesCS7A01G294800.2	Wheat	nucleus	21.7	17.62

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF49	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS5A01G396800	EnsemblPlants:TraesCS5A01G396800.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:+:591442764..591446648

Molecular Weight (calculated)

45723.9 Da

IEP (calculated)

7.943

GRAVY (calculated)

-0.858

Length

424 amino acids

Sequence
(BLAST)

001: MADRRGDGMR QQPPYSSGHQ ERVFDGGGGG GGPAFGNDYD PGSSYMSLLG SGVNPQQSLP AQQAWGVDDV APPTINLTPH FSMANYVPTS SYQQHQTAAS
101: FVAPLAANLH PYPSSSSSSY FQADLPPQWP PRAMAPSPSS SLLPRNFTVH QTPAYPQSHH HEQQMHMQLL RAAALGGPHA APAPPIEQPA KGGYNWRKYG
201: QKQLKDAESP RSYYKCTRDA CPVKKIVERS FDGCIKEITY KGRHTHPRPP EPRRSGAEDA AAPSSAVGAH QDDELSDDED DGEEGIDIGS GAGGPAGQRV
301: VRKHKIILQT PSEVDLLDDG YRWRKYGQKV VKGNPRPRSY YKCTAENCNV RKQIERASTD PRCVLTTYTG RHNHDPPGRG AGVAAAAGAG GGSSSDTVPS
401: IVNPSGNTLH QPSGIHQLKE ENRD

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.