Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G396800.1 | Wheat | nucleus | 94.76 | 93.87 |
| TraesCS5B01G401800.1 | Wheat | nucleus | 92.62 | 92.4 |
| EER93417 | Sorghum | nucleus | 60.95 | 60.38 |
| Zm00001d034084_P001 | Maize | nucleus | 60.0 | 59.15 |
| TraesCS5D01G116100.1 | Wheat | nucleus | 32.86 | 27.77 |
| TraesCS1D01G072900.1 | Wheat | nucleus | 29.52 | 26.72 |
| TraesCS4D01G151700.1 | Wheat | nucleus | 30.24 | 26.19 |
| TraesCS2D01G190500.1 | Wheat | nucleus | 27.14 | 24.89 |
| TraesCS1D01G292700.1 | Wheat | nucleus, plastid | 29.29 | 24.26 |
| TraesCS3D01G341100.1 | Wheat | nucleus | 30.95 | 23.17 |
| TraesCS7D01G239800.2 | Wheat | nucleus | 30.24 | 20.22 |
| TraesCS5D01G266300.1 | Wheat | nucleus | 32.38 | 20.06 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 27.86 | 18.34 |
| TraesCS7D01G287200.1 | Wheat | nucleus | 22.14 | 17.82 |
| TraesCS2D01G332300.1 | Wheat | nucleus | 30.48 | 17.41 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF49 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS5D01G406500 | EnsemblPlants:TraesCS5D01G406500.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:+:472236772..472244049
Molecular Weight (calculated)
45475.5 Da
IEP (calculated)
7.713
GRAVY (calculated)
-0.872
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRRGDAMR QQPPYSSGHQ ERVFDGGGGP AFGNDYDTAG SSYMALLGSG VNPQQSLPPQ QAWGVDEVTP PTINLTPQFS MANYAPTSSY QQHQTTASFV
101: SPLAANLHPY PSSSSSSYFQ ADLPPQWPPR AMAPSPSSSL LPRNFTVHQT PAYPHHHEQQ MHMQLLRAAA LGGPHAAPAP PIEQPAKDGY NWRKYGQKQL
201: KDAESPRSYY KCTRDACPVK KIVERSFDGC IKEITYKGRH THPRPPEPRR AGAEDAAAPS SAVGAHQEDE LSDDEDDGEE GHDIGSGAGG PAGQRVVRKH
301: KIILQTPSEV DLLDDGYRWR KYGQKVVKGN PRPRSYYKCT AENCNVRKQI ERASTDPRCV LTTYTGRHNH DPPGRGAGAA AAAGAGGGSS SDPVASAVNP
401: FGSTLHQPSG IHQLKEESRD
101: SPLAANLHPY PSSSSSSYFQ ADLPPQWPPR AMAPSPSSSL LPRNFTVHQT PAYPHHHEQQ MHMQLLRAAA LGGPHAAPAP PIEQPAKDGY NWRKYGQKQL
201: KDAESPRSYY KCTRDACPVK KIVERSFDGC IKEITYKGRH THPRPPEPRR AGAEDAAAPS SAVGAHQEDE LSDDEDDGEE GHDIGSGAGG PAGQRVVRKH
301: KIILQTPSEV DLLDDGYRWR KYGQKVVKGN PRPRSYYKCT AENCNVRKQI ERASTDPRCV LTTYTGRHNH DPPGRGAGAA AAAGAGGGSS SDPVASAVNP
401: FGSTLHQPSG IHQLKEESRD
001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT
Arabidopsis Description
WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.