Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026438.1-P | Field mustard | nucleus | 98.69 | 98.69 |
| CDX94335 | Canola | nucleus | 84.83 | 88.13 |
| CDY69527 | Canola | nucleus | 74.16 | 72.93 |
| CDY42736 | Canola | nucleus | 70.79 | 71.46 |
| AT4G26440.1 | Thale cress | nucleus | 72.85 | 68.49 |
| CDY05016 | Canola | nucleus | 25.28 | 42.32 |
| CDY14055 | Canola | nucleus | 24.53 | 41.07 |
| CDY11947 | Canola | nucleus | 42.88 | 39.9 |
| CDY36788 | Canola | nucleus | 44.57 | 38.14 |
| GSMUA_Achr5P23900_001 | Banana | nucleus | 38.95 | 36.81 |
| CDY29685 | Canola | nucleus | 23.6 | 36.0 |
| CDY49388 | Canola | nucleus | 44.57 | 35.47 |
| CDX97834 | Canola | nucleus | 23.97 | 35.46 |
| CDY10720 | Canola | nucleus | 24.16 | 34.58 |
| GSMUA_Achr6P03500_001 | Banana | nucleus | 33.15 | 34.37 |
| CDY24017 | Canola | nucleus | 24.16 | 34.13 |
| HORVU7Hr1G049130.1 | Barley | nucleus, plastid | 15.54 | 33.88 |
| CDX84848 | Canola | nucleus | 23.97 | 33.86 |
| CDX91470 | Canola | nucleus, plastid | 29.96 | 33.61 |
| CDY65564 | Canola | nucleus, plastid | 29.59 | 33.55 |
| HORVU0Hr1G004890.10 | Barley | nucleus | 37.45 | 33.22 |
| CDY69941 | Canola | nucleus, plastid | 29.59 | 33.12 |
| CDY18383 | Canola | nucleus, plastid | 29.78 | 33.06 |
| CDY53941 | Canola | nucleus | 27.15 | 32.95 |
| CDY07729 | Canola | nucleus | 29.03 | 32.77 |
| GSMUA_Achr11P... | Banana | nucleus | 39.51 | 32.61 |
| CDX98138 | Canola | nucleus | 27.9 | 32.6 |
| CDY36419 | Canola | nucleus | 27.72 | 32.53 |
| CDY14459 | Canola | nucleus, plastid | 29.4 | 32.04 |
| GSMUA_Achr5P04150_001 | Banana | nucleus | 37.83 | 31.91 |
| CDY62213 | Canola | nucleus | 27.72 | 31.9 |
| CDY72350 | Canola | nucleus | 8.61 | 31.72 |
| CDY70490 | Canola | nucleus | 30.52 | 31.47 |
| CDY33788 | Canola | nucleus | 25.84 | 31.22 |
| CDY32799 | Canola | nucleus | 35.02 | 31.11 |
| GSMUA_Achr4P01600_001 | Banana | nucleus | 38.76 | 31.08 |
| CDY02051 | Canola | nucleus | 16.1 | 31.05 |
| CDX89317 | Canola | nucleus | 30.9 | 30.9 |
| CDX74281 | Canola | nucleus | 26.03 | 30.82 |
| CDX96873 | Canola | nucleus | 26.78 | 30.69 |
| CDY45169 | Canola | nucleus | 27.9 | 30.66 |
| CDY03003 | Canola | nucleus | 27.9 | 30.47 |
| CDX94303 | Canola | nucleus | 30.34 | 30.45 |
| Os08t0499300-01 | Rice | nucleus | 38.02 | 30.12 |
| CDY37191 | Canola | nucleus | 27.34 | 30.04 |
| HORVU5Hr1G072020.1 | Barley | nucleus | 38.02 | 30.03 |
| CDX97359 | Canola | nucleus | 30.15 | 29.98 |
| CDY16122 | Canola | nucleus | 25.09 | 29.91 |
| TraesCS5A01G258100.1 | Wheat | nucleus | 37.83 | 29.84 |
| TraesCS5D01G266300.1 | Wheat | nucleus | 37.83 | 29.79 |
| CDX92808 | Canola | nucleus | 29.21 | 29.77 |
| CDY14304 | Canola | nucleus | 30.34 | 29.62 |
| CDY46692 | Canola | nucleus | 29.03 | 29.52 |
| Zm00001d025669_P001 | Maize | nucleus | 36.52 | 29.41 |
| TraesCS5B01G257300.1 | Wheat | nucleus | 37.27 | 29.31 |
| TraesCS7D01G239800.2 | Wheat | nucleus | 34.46 | 29.3 |
| TraesCS7B01G136400.2 | Wheat | nucleus, plastid | 34.27 | 28.91 |
| TraesCS2A01G330500.1 | Wheat | nucleus | 39.7 | 28.84 |
| VIT_19s0015g01870.t01 | Wine grape | nucleus | 40.26 | 28.82 |
| OQU80981 | Sorghum | nucleus | 36.89 | 28.76 |
| CDY48650 | Canola | nucleus, plastid | 23.78 | 28.67 |
| CDX74976 | Canola | nucleus | 21.35 | 28.64 |
| CDX93073 | Canola | nucleus | 19.66 | 28.53 |
| TraesCS2B01G351600.1 | Wheat | nucleus | 38.95 | 28.49 |
| TraesCS2D01G332300.1 | Wheat | nucleus | 39.14 | 28.44 |
| Zm00001d003331_P001 | Maize | nucleus | 37.08 | 28.16 |
| TraesCS7A01G240800.1 | Wheat | nucleus | 34.27 | 28.11 |
| Solyc07g066220.2.1 | Tomato | nucleus | 38.76 | 28.01 |
| PGSC0003DMT400056952 | Potato | nucleus | 39.14 | 27.94 |
| CDX91348 | Canola | nucleus | 20.97 | 27.86 |
| Zm00001d052847_P001 | Maize | nucleus | 37.83 | 27.71 |
| KRH62550 | Soybean | nucleus | 39.14 | 27.46 |
| KXG26525 | Sorghum | nucleus | 38.02 | 27.43 |
| CDY62292 | Canola | nucleus | 10.49 | 26.92 |
| KXG35872 | Sorghum | nucleus | 28.84 | 26.42 |
| KRH56379 | Soybean | nucleus | 38.2 | 26.29 |
| Zm00001d020881_P002 | Maize | nucleus | 28.84 | 26.15 |
| Zm00001d006001_P006 | Maize | nucleus | 27.72 | 25.78 |
| Os09t0481700-01 | Rice | nucleus | 29.4 | 24.8 |
| CDY50038 | Canola | nucleus | 19.85 | 24.31 |
| CDY62293 | Canola | nucleus | 9.18 | 24.14 |
| CDY36463 | Canola | nucleus | 17.98 | 24.06 |
| CDY26094 | Canola | nucleus | 18.54 | 23.8 |
| CDY08253 | Canola | nucleus | 18.54 | 23.8 |
| CDY47543 | Canola | nucleus | 12.17 | 22.97 |
| CDX79729 | Canola | nucleus | 13.67 | 22.67 |
| CDY46768 | Canola | nucleus | 13.67 | 22.6 |
| CDY46769 | Canola | nucleus | 13.67 | 22.6 |
| CDY10548 | Canola | nucleus | 17.98 | 22.27 |
| CDY47546 | Canola | nucleus | 15.73 | 21.37 |
| CDY59057 | Canola | nucleus | 17.79 | 21.25 |
| CDY23265 | Canola | nucleus | 17.79 | 20.79 |
| Os04t0471700-00 | Rice | nucleus | 38.02 | 20.34 |
| CDY67588 | Canola | nucleus | 19.1 | 19.77 |
| CDY54360 | Canola | nucleus | 18.73 | 17.99 |
| CDY13396 | Canola | nucleus | 16.85 | 16.95 |
| CDY52777 | Canola | nucleus, plastid | 4.31 | 13.45 |
| CDX72277 | Canola | nucleus | 17.79 | 12.96 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DJF4 | EnsemblPlants:CDX89336 | ProteinID:CDX89336 | ProteinID:CDX89336.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00149561001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF86 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EED3A4 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g15570D
Coordinates
chrLK031858:+:981927..983760
Molecular Weight (calculated)
58866.3 Da
IEP (calculated)
6.563
GRAVY (calculated)
-0.737
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGFSDTFAV MGEWVDCSTN HKKRSKAELD RETSLEEDVK NKDFLQTNFQ ERSSYSGGGL SERVAARAGF KVPSINTESN LWSLNISSPG ATPATLLESP
101: VFLSNPLLSP TTGKLSSPPS DHKAKDEFFD PTIIGVESDA SQVYEQTHNI GLGGAPADDG YNWRKYGQKL VKGSEYPRSY YKCTHPNCEV KKKVERSREG
201: HITEIIYAKT HNHPKPPLNR RSGIGSSGTC NDIQIDGTEQ QGLAGTNENI EWTSPVRNYG SMQVQNRTQF GYGDAAFFKD EDEEDRTSHM SDSMGYYGEA
301: DESEPKRRKL EAYATEMSGS TRANRAPKVV VKTTSDIDIL EDGYRWRKYG QKVVKGNPNP RSYYKCTATG CIVTKHVERA SDDLTSVLTT YIGKHTHEVP
401: AARSSSSHMS SGSSGTIQGG LPTQTHNHHE HYPVPHSRSE GLVTASSSLF DFQTPMRPPW AGFSVYGGET ELLGLSISGL AIGQERFSMP ATGDPAGLML
501: QLPAEPKLEQ VSQQELGFSR RSLIYRDTSS LPEI
101: VFLSNPLLSP TTGKLSSPPS DHKAKDEFFD PTIIGVESDA SQVYEQTHNI GLGGAPADDG YNWRKYGQKL VKGSEYPRSY YKCTHPNCEV KKKVERSREG
201: HITEIIYAKT HNHPKPPLNR RSGIGSSGTC NDIQIDGTEQ QGLAGTNENI EWTSPVRNYG SMQVQNRTQF GYGDAAFFKD EDEEDRTSHM SDSMGYYGEA
301: DESEPKRRKL EAYATEMSGS TRANRAPKVV VKTTSDIDIL EDGYRWRKYG QKVVKGNPNP RSYYKCTATG CIVTKHVERA SDDLTSVLTT YIGKHTHEVP
401: AARSSSSHMS SGSSGTIQGG LPTQTHNHHE HYPVPHSRSE GLVTASSSLF DFQTPMRPPW AGFSVYGGET ELLGLSISGL AIGQERFSMP ATGDPAGLML
501: QLPAEPKLEQ VSQQELGFSR RSLIYRDTSS LPEI
001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
Arabidopsis Description
WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.