Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010431.1-P | Field mustard | nucleus | 97.99 | 98.35 |
| CDX97359 | Canola | nucleus | 95.61 | 97.39 |
| CDX89317 | Canola | nucleus | 80.8 | 82.77 |
| CDX92808 | Canola | nucleus | 78.79 | 82.25 |
| AT4G26640.2 | Thale cress | nucleus | 83.73 | 82.23 |
| CDX94303 | Canola | nucleus | 79.89 | 82.14 |
| CDY46692 | Canola | nucleus | 77.7 | 80.95 |
| CDY70490 | Canola | nucleus | 58.68 | 61.97 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 52.83 | 48.98 |
| Solyc12g014610.1.1 | Tomato | nucleus | 48.81 | 43.7 |
| PGSC0003DMT400076670 | Potato | nucleus | 48.45 | 43.37 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 19.56 | 43.32 |
| Solyc07g065260.2.1 | Tomato | nucleus | 46.25 | 42.45 |
| PGSC0003DMT400057409 | Potato | nucleus | 46.25 | 42.45 |
| CDY05016 | Canola | nucleus | 24.68 | 42.32 |
| CDY14055 | Canola | nucleus | 24.68 | 42.32 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 38.76 | 41.33 |
| KRH49522 | Soybean | extracellular, plasma membrane | 18.65 | 40.48 |
| Os07t0583700-01 | Rice | nucleus | 43.14 | 38.19 |
| Zm00001d021947_P002 | Maize | nucleus | 42.23 | 37.68 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 39.49 | 37.5 |
| KXG36569 | Sorghum | nucleus | 41.68 | 37.32 |
| CDY29685 | Canola | nucleus | 23.77 | 37.14 |
| Zm00001d006702_P001 | Maize | nucleus | 41.32 | 37.05 |
| CDY10720 | Canola | nucleus | 25.23 | 37.0 |
| CDX97834 | Canola | nucleus | 24.31 | 36.84 |
| CDX84848 | Canola | nucleus | 23.95 | 34.66 |
| CDY24017 | Canola | nucleus | 23.95 | 34.66 |
| CDY36419 | Canola | nucleus | 28.52 | 34.29 |
| CDX98138 | Canola | nucleus | 28.34 | 33.92 |
| CDY53941 | Canola | nucleus | 26.87 | 33.41 |
| CDX91470 | Canola | nucleus, plastid | 29.07 | 33.4 |
| CDX96873 | Canola | nucleus | 28.34 | 33.26 |
| CDY65564 | Canola | nucleus, plastid | 28.52 | 33.12 |
| CDY02051 | Canola | nucleus | 16.64 | 32.85 |
| CDY62213 | Canola | nucleus | 27.79 | 32.76 |
| CDY69941 | Canola | nucleus, plastid | 28.52 | 32.7 |
| CDY33788 | Canola | nucleus | 26.14 | 32.35 |
| CDY18383 | Canola | nucleus, plastid | 28.34 | 32.22 |
| CDY72350 | Canola | nucleus | 8.41 | 31.72 |
| CDY07729 | Canola | nucleus | 27.24 | 31.5 |
| CDY45169 | Canola | nucleus | 27.97 | 31.48 |
| CDY16122 | Canola | nucleus | 25.78 | 31.47 |
| CDY37191 | Canola | nucleus | 27.79 | 31.28 |
| CDX74281 | Canola | nucleus | 25.78 | 31.26 |
| CDY03003 | Canola | nucleus | 27.61 | 30.88 |
| CDY14459 | Canola | nucleus, plastid | 27.61 | 30.82 |
| CDX94335 | Canola | nucleus | 28.52 | 30.35 |
| CDX89336 | Canola | nucleus | 29.62 | 30.34 |
| CDY69527 | Canola | nucleus | 29.8 | 30.02 |
| CDX93073 | Canola | nucleus | 20.11 | 29.89 |
| CDY42736 | Canola | nucleus | 28.88 | 29.87 |
| CDY11947 | Canola | nucleus | 30.35 | 28.92 |
| CDY48650 | Canola | nucleus, plastid | 23.4 | 28.89 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 32.36 | 28.78 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 32.18 | 28.76 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 32.18 | 28.66 |
| CDY36788 | Canola | nucleus | 32.54 | 28.53 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 31.99 | 27.43 |
| CDY62292 | Canola | nucleus | 10.42 | 27.4 |
| CDX74976 | Canola | nucleus | 19.38 | 26.63 |
| CDY49388 | Canola | nucleus | 32.36 | 26.38 |
| CDY50038 | Canola | nucleus | 20.84 | 26.15 |
| CDX91348 | Canola | nucleus | 19.01 | 25.87 |
| CDY62293 | Canola | nucleus | 9.32 | 25.12 |
| CDY36463 | Canola | nucleus | 17.0 | 23.31 |
| CDY32799 | Canola | nucleus | 24.68 | 22.46 |
| CDY47543 | Canola | nucleus | 11.15 | 21.55 |
| CDY23265 | Canola | nucleus | 17.37 | 20.79 |
| CDY10548 | Canola | nucleus | 16.09 | 20.42 |
| CDY47546 | Canola | nucleus | 14.63 | 20.36 |
| CDX79729 | Canola | nucleus | 11.88 | 20.19 |
| CDY46768 | Canola | nucleus | 11.88 | 20.12 |
| CDY46769 | Canola | nucleus | 11.88 | 20.12 |
| CDY59057 | Canola | nucleus | 15.9 | 19.46 |
| CDY13396 | Canola | nucleus | 17.37 | 17.89 |
| CDY26094 | Canola | nucleus | 13.16 | 17.31 |
| CDY08253 | Canola | nucleus | 13.16 | 17.31 |
| CDY52777 | Canola | nucleus, plastid | 5.12 | 16.37 |
| CDY67588 | Canola | nucleus | 14.44 | 15.31 |
| CDY54360 | Canola | nucleus | 14.99 | 14.75 |
| CDX72277 | Canola | nucleus | 17.37 | 12.96 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078FN36 | UniProt:A0A078FN36 | EnsemblPlants:CDY14304 | ProteinID:CDY14304 |
| ProteinID:CDY14304.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00078905001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEDB6B | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g14350DBnaA08g14350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FN36]
Coordinates
chrLK032041:+:764487..767992
Molecular Weight (calculated)
60011.1 Da
IEP (calculated)
7.401
GRAVY (calculated)
-0.976
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLPQANNDR EELQVDCSAT VDPTARHNSA GGGGGGGARY KLMSPAMLPI SRSTTNITIP PGLSPTSFLE SPVFISNIKP EPSPTTGSLF KPRPVHVSSS
101: SYTGRAFHQN TFTEHNSSEF EFRPPASNMV YAELDKHKRE PPVQFQAQGH GASHSPEATA SSSEPSRPTP PVQTPPTSSD IPAGSDQEES VQTSQNEPRG
201: SAPPTVLADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFETSHD GRITDIIYKG THDHPKPQPG RRNSGGVGMA AQEERVGKYP PMTRRDGEKG
301: VYSLSQAIEQ TGNAEVASTT NDGGDVAASN RNKDDPEDDD PYTKRRRLDG NMEITPLVKP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY
401: YKCTAPGCPV RKHVERASHD PKAVITTYEG KHNHDVPTSK SGSSNHHEIQ PRFRPPDETD TISLNLGVGI SSNGPNENQQ LVNQTHPNGV GFRFVHAAPV
501: STYYASMNQY GPRETQSETQ NGDISSLNHS SSYPYPHNNI GRIQTGP
101: SYTGRAFHQN TFTEHNSSEF EFRPPASNMV YAELDKHKRE PPVQFQAQGH GASHSPEATA SSSEPSRPTP PVQTPPTSSD IPAGSDQEES VQTSQNEPRG
201: SAPPTVLADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFETSHD GRITDIIYKG THDHPKPQPG RRNSGGVGMA AQEERVGKYP PMTRRDGEKG
301: VYSLSQAIEQ TGNAEVASTT NDGGDVAASN RNKDDPEDDD PYTKRRRLDG NMEITPLVKP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY
401: YKCTAPGCPV RKHVERASHD PKAVITTYEG KHNHDVPTSK SGSSNHHEIQ PRFRPPDETD TISLNLGVGI SSNGPNENQQ LVNQTHPNGV GFRFVHAAPV
501: STYYASMNQY GPRETQSETQ NGDISSLNHS SSYPYPHNNI GRIQTGP
001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.