Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53941 | Canola | nucleus | 81.28 | 89.77 |
| CDY52777 | Canola | nucleus, plastid | 30.25 | 85.96 |
| CDY45169 | Canola | nucleus | 77.16 | 77.16 |
| CDY03003 | Canola | nucleus | 77.37 | 76.89 |
| AT2G03340.1 | Thale cress | nucleus | 81.07 | 76.8 |
| CDY33788 | Canola | nucleus | 60.91 | 66.97 |
| CDY36419 | Canola | nucleus | 62.14 | 66.37 |
| CDX98138 | Canola | nucleus | 61.93 | 65.86 |
| CDY62213 | Canola | nucleus | 61.93 | 64.87 |
| CDX96873 | Canola | nucleus | 61.52 | 64.16 |
| CDY16122 | Canola | nucleus | 58.85 | 63.84 |
| VIT_01s0011g00220.t01 | Wine grape | nucleus | 54.53 | 52.79 |
| KRH70820 | Soybean | nucleus, plastid | 39.09 | 52.2 |
| KRH74950 | Soybean | nucleus | 47.94 | 51.21 |
| PGSC0003DMT400072836 | Potato | nucleus | 53.29 | 50.98 |
| Solyc05g012770.2.1 | Tomato | nucleus | 53.09 | 50.79 |
| KRG89512 | Soybean | nucleus | 44.86 | 49.66 |
| KRH50544 | Soybean | nucleus | 44.86 | 49.32 |
| CDX74281 | Canola | nucleus | 38.48 | 41.46 |
| CDY05016 | Canola | nucleus | 26.54 | 40.44 |
| CDY14055 | Canola | nucleus | 26.54 | 40.44 |
| CDY29685 | Canola | nucleus | 26.34 | 36.57 |
| CDY10720 | Canola | nucleus | 27.37 | 35.66 |
| CDX97834 | Canola | nucleus | 26.34 | 35.46 |
| CDY24017 | Canola | nucleus | 26.13 | 33.6 |
| CDX84848 | Canola | nucleus | 25.72 | 33.07 |
| CDY65564 | Canola | nucleus, plastid | 30.86 | 31.85 |
| CDX91470 | Canola | nucleus, plastid | 31.07 | 31.72 |
| CDY02051 | Canola | nucleus | 17.49 | 30.69 |
| CDY07729 | Canola | nucleus | 29.84 | 30.66 |
| CDY69941 | Canola | nucleus, plastid | 30.04 | 30.61 |
| CDY18383 | Canola | nucleus, plastid | 30.25 | 30.56 |
| CDY72350 | Canola | nucleus | 9.05 | 30.34 |
| CDY14459 | Canola | nucleus, plastid | 30.45 | 30.2 |
| CDX74976 | Canola | nucleus | 24.69 | 30.15 |
| CDX91348 | Canola | nucleus | 23.87 | 28.86 |
| CDY70490 | Canola | nucleus | 30.45 | 28.57 |
| CDX89317 | Canola | nucleus | 31.28 | 28.46 |
| CDX94303 | Canola | nucleus | 31.07 | 28.38 |
| CDX97359 | Canola | nucleus | 31.28 | 28.31 |
| CDY46692 | Canola | nucleus | 30.04 | 27.81 |
| CDY14304 | Canola | nucleus | 31.28 | 27.79 |
| CDX92808 | Canola | nucleus | 29.84 | 27.67 |
| CDX94335 | Canola | nucleus | 29.22 | 27.63 |
| CDX89336 | Canola | nucleus | 30.04 | 27.34 |
| CDY69527 | Canola | nucleus | 30.25 | 27.07 |
| CDY48650 | Canola | nucleus, plastid | 24.49 | 26.86 |
| CDY42736 | Canola | nucleus | 29.22 | 26.84 |
| CDY11947 | Canola | nucleus | 30.25 | 25.61 |
| CDY62292 | Canola | nucleus | 10.91 | 25.48 |
| CDY36463 | Canola | nucleus | 20.78 | 25.31 |
| CDX93073 | Canola | nucleus | 19.14 | 25.27 |
| CDY36788 | Canola | nucleus | 31.89 | 24.84 |
| CDY49388 | Canola | nucleus | 33.54 | 24.29 |
| CDY62293 | Canola | nucleus | 10.08 | 24.14 |
| CDX79729 | Canola | nucleus | 15.64 | 23.6 |
| CDY46769 | Canola | nucleus | 15.64 | 23.53 |
| CDY46768 | Canola | nucleus | 15.64 | 23.53 |
| CDY23265 | Canola | nucleus | 21.81 | 23.19 |
| CDY50038 | Canola | nucleus | 20.37 | 22.71 |
| CDY08253 | Canola | nucleus | 17.28 | 20.19 |
| CDY26094 | Canola | nucleus | 17.28 | 20.19 |
| CDY32799 | Canola | nucleus | 24.9 | 20.13 |
| CDY10548 | Canola | nucleus | 17.7 | 19.95 |
| CDY59057 | Canola | nucleus | 18.11 | 19.69 |
| CDY47546 | Canola | nucleus | 15.43 | 19.08 |
| CDY13396 | Canola | nucleus | 20.78 | 19.02 |
| CDY47543 | Canola | nucleus | 10.7 | 18.37 |
| CDX72277 | Canola | nucleus | 21.19 | 14.05 |
| CDY67588 | Canola | nucleus | 14.81 | 13.95 |
| CDY54360 | Canola | nucleus | 15.84 | 13.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HHJ4 | UniProt:A0A078HHJ4 | EnsemblPlants:CDY37191 | ProteinID:CDY37191 |
| ProteinID:CDY37191.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00063487001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF84 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDE27A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g34990DBnaC02g34990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHJ4]
Coordinates
chrLK032394:-:293965..295913
Molecular Weight (calculated)
53495.9 Da
IEP (calculated)
8.452
GRAVY (calculated)
-0.884
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKEEEEQQ QTKQSLTSKS STGGASRPTI SLPPRPFGEM FYSGGVGFSG FSPGPMTLVS NMFSDPDEFK SFSQLVAGAV ASPAAAAVVA SAHQPPVSSV
101: GGGGDSLLDP RIKQNRPTGL MITQPPGMFT VPAGLSPATL LDSPSFFGLF SPIQGSFGTT HQQALAQVTA QAVHGNNVQI QSESSTQQQQ TSLTEVPSFS
201: APVQDQRDNS EVTVYEHRSQ PQNADKPADD GYNWRKYGQK QVKGSDFPRS YYKCTHGACP VKKKVERSVD GQVTEIIYKG QHNHEPPQNN KRGRDNDNNN
301: NNNNGSCNSL NKSKRDQETS QVTTTEQISE ASDSEEHTKM SLIPREDSNK TFECCRNTEV RVSEPVSSSN RTVTEPRIIV QTKSEVDLLD DGYRWRKYGQ
401: KVVKGNPYPR SYYKCTTPGC RVRKHVERAA NDPKAVITTY EGKHNHDIPA SRTSSHQLRP NNNLSTVNLN QQQTVARLRL KEEQIT
101: GGGGDSLLDP RIKQNRPTGL MITQPPGMFT VPAGLSPATL LDSPSFFGLF SPIQGSFGTT HQQALAQVTA QAVHGNNVQI QSESSTQQQQ TSLTEVPSFS
201: APVQDQRDNS EVTVYEHRSQ PQNADKPADD GYNWRKYGQK QVKGSDFPRS YYKCTHGACP VKKKVERSVD GQVTEIIYKG QHNHEPPQNN KRGRDNDNNN
301: NNNNGSCNSL NKSKRDQETS QVTTTEQISE ASDSEEHTKM SLIPREDSNK TFECCRNTEV RVSEPVSSSN RTVTEPRIIV QTKSEVDLLD DGYRWRKYGQ
401: KVVKGNPYPR SYYKCTTPGC RVRKHVERAA NDPKAVITTY EGKHNHDIPA SRTSSHQLRP NNNLSTVNLN QQQTVARLRL KEEQIT
001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
Arabidopsis Description
WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.