CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89512	Soybean	nucleus	84.39	84.97
KRH70820	Soybean	nucleus, plastid	55.43	67.31
KRH74950	Soybean	nucleus	65.84	63.96
CDY53941	Canola	nucleus	50.91	51.14
CDY33788	Canola	nucleus	50.45	50.45
VIT_01s0011g00220.t01	Wine grape	nucleus	56.56	49.8
CDY36419	Canola	nucleus	50.91	49.45
CDY16122	Canola	nucleus	50.0	49.33
Solyc05g012770.2.1	Tomato	nucleus	56.56	49.21
PGSC0003DMT400072836	Potato	nucleus	56.56	49.21
CDX98138	Canola	nucleus	50.68	49.02
Bra026554.1-P	Field mustard	nucleus	51.13	47.58
CDY62213	Canola	nucleus	49.77	47.41
Bra024780.1-P	Field mustard	nucleus	52.04	47.33
AT2G03340.1	Thale cress	nucleus	54.75	47.17
Bra026869.1-P	Field mustard	nucleus	51.13	47.08
CDY45169	Canola	nucleus	51.58	46.91
Bra016716.1-P	Field mustard	nucleus	49.32	46.88
CDX96873	Canola	nucleus	49.32	46.78
CDY03003	Canola	nucleus	50.91	46.01
Bra019697.1-P	Field mustard	nucleus	51.13	45.84
CDY37191	Canola	nucleus	49.32	44.86
AT1G13960.1	Thale cress	nucleus	51.58	44.36
KRH01236	Soybean	nucleus	50.91	43.27
KRH44949	Soybean	nucleus	50.68	42.83
KRH67621	Soybean	nucleus	32.35	31.92
KRG95903	Soybean	nucleus	33.26	31.21
KRH55277	Soybean	nucleus	14.93	31.13
CDY72350	Canola	nucleus	10.18	31.03
KRH34225	Soybean	nucleus	13.35	30.73
KRH49522	Soybean	extracellular, plasma membrane	17.19	30.16
KRG98195	Soybean	nucleus	33.71	27.49
KRH76058	Soybean	nucleus	31.0	27.02
KRH30155	Soybean	nucleus	33.48	27.01
KRH17125	Soybean	nucleus	34.84	26.78
KRH65526	Soybean	nucleus	30.54	26.63
KRH72765	Soybean	nucleus	34.62	26.38
KRH03056	Soybean	nucleus	6.79	25.42
CDY62292	Canola	nucleus	11.76	25.0
KRH46302	Soybean	nucleus	32.58	24.96
KRH00362	Soybean	nucleus	30.54	24.95
KRG98564	Soybean	nucleus	32.35	24.78
KRH40825	Soybean	nucleus	29.86	24.31
KRH54934	Soybean	nucleus	25.79	24.26
KRH26105	Soybean	nucleus	25.57	24.2
Bra030848.1-P	Field mustard	nucleus	11.09	24.14
KRH14276	Soybean	nucleus	31.9	24.1
KRH73864	Soybean	nucleus	31.9	23.98
CDY62293	Canola	nucleus	10.63	23.15
KRH14103	Soybean	nucleus	26.47	23.03
KRH74020	Soybean	nucleus	26.02	22.68
KRH03057	Soybean	nucleus	19.46	22.28
KRH72303	Soybean	nucleus	25.57	21.2
KRH40304	Soybean	nucleus	32.35	19.48
KRH62550	Soybean	nucleus	33.48	19.45
KRH34226	Soybean	nucleus	14.71	19.35
KRH00919	Soybean	nucleus	32.35	19.22
KRH56379	Soybean	nucleus	33.03	18.81
KRH34224	Soybean	nucleus	13.57	16.35

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0R0J6Y4	EMBL:ACUP02004703	EnsemblPlantsGene:GLYMA_07G227200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlants:KRH50544	ProteinID:KRH50544	ProteinID:KRH50544.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221
PANTHER:PTHR31221:SF84	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000549EFFD	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:40486501..40491612

Molecular Weight (calculated)

48778.6 Da

IEP (calculated)

8.183

GRAVY (calculated)

-0.890

Length

442 amino acids

Sequence
(BLAST)

001: MVGGRNGEGA GEQAPPPSTA ARHGTTLRPR VSTESVFSCR YGGLGPMTLL SSFFGDGDEC KSFSELLGGA MVDPTAPSPM PTTPFTLPHG FIDSPSPQGQ
101: FGMTHQQMLA QITSQAVPAH FNVQIHSEHP FSISAVSATS LTQFPTGSST RVKESLHYSH SEQKLQSSSV NADKPNDDGY NWRKYGQKHV KGRDFSRSYY
201: KCTHPNCPVK KKLERSLEGH VTAIIYKGEH NHQRPHPNKI TKETQTSNIN SVSKMDLESS QATGEHGSGT SDSEEVGDHE SEEDEKNDEP DAKRRNTEVR
301: LQDPASLHRT VAETRIIVQT TSEVDLLDDG YRWRKYGQKV VKGNPYPRSY YKCATQGCNV RKHVERASMD PKAVLTTYEG KHNHDVPVAK TNSHTLANNS
401: ASQLKAQNIA IPDDKHSFSS RGVRGNEQRP LGSLRLKEEQ IT

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.