Factsheet for Bra030848.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62293	Canola	nucleus	96.06	96.06
CDY62292	Canola	nucleus	65.52	63.94
CDY72350	Canola	nucleus	42.86	60.0
Bra037106.1-P	Field mustard	nucleus	48.77	22.92
Bra030847.1-P	Field mustard	nucleus	47.78	21.7
Bra028707.1-P	Field mustard	nucleus	22.17	14.11
KRH70820	Soybean	nucleus, plastid	24.63	13.74
Bra021623.1-P	Field mustard	nucleus	23.15	13.43
Bra038006.1-P	Field mustard	nucleus	41.87	13.0
Bra018325.1-P	Field mustard	nucleus	22.66	12.33
Solyc05g012770.2.1	Tomato	nucleus	30.54	12.2
PGSC0003DMT400072836	Potato	nucleus	30.54	12.2
Bra028971.1-P	Field mustard	nucleus	28.08	11.75
Bra022786.1-P	Field mustard	nucleus	21.67	11.64
Bra016716.1-P	Field mustard	nucleus	26.6	11.61
Bra024780.1-P	Field mustard	nucleus	27.59	11.52
KRH74950	Soybean	nucleus	25.62	11.43
KRG89512	Soybean	nucleus	24.63	11.39
Bra026554.1-P	Field mustard	nucleus	26.6	11.37
KRH50544	Soybean	nucleus	24.14	11.09
Bra019697.1-P	Field mustard	nucleus	26.6	10.95
Bra026869.1-P	Field mustard	nucleus	25.62	10.83
Bra028939.1-P	Field mustard	nucleus	23.65	10.69
Bra019105.1-P	Field mustard	nucleus	26.6	10.21
VIT_01s0011g00220.t01	Wine grape	nucleus	25.12	10.16
Bra017117.1-P	Field mustard	nucleus	23.15	10.15
Bra005104.1-P	Field mustard	nucleus	22.66	10.07
Bra026414.1-P	Field mustard	nucleus	26.11	9.91
Bra000064.1-P	Field mustard	nucleus	22.66	9.73
Bra010431.1-P	Field mustard	nucleus	26.11	9.72
Bra005210.1-P	Field mustard	nucleus	19.21	9.54
Bra023112.1-P	Field mustard	nucleus	19.7	9.52
Bra013187.1-P	Field mustard	nucleus	20.69	9.4
Bra026438.1-P	Field mustard	nucleus	24.63	9.36
Bra010266.1-P	Field mustard	nucleus	19.7	8.75
Bra002828.1-P	Field mustard	nucleus	27.59	8.32
Bra019095.1-P	Field mustard	nucleus	26.11	7.03
Bra024035.1-P	Field mustard	nucleus	19.7	6.79

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra030848	EnsemblPlants:Bra030848.1	EnsemblPlants:Bra030848.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4EPX7	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000254705F	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	:	:

Description

AT1G55600 (E=1e-032) WRKY10, ATWRKY10, MINI3 | WRKY10 (WRKY DNA-BINDING PROTEIN 10); transcription factor

Coordinates

chrA08:+:251554..252566

Molecular Weight (calculated)

22762.7 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.740

Length

203 amino acids

Sequence
(BLAST)

001: MEMTSYSASQ LIFSIAPPSP DAIIGPPEMV ESSGGNHATM MISNNGLPHQ QMDVDQAPED HNIIDLNVVP SSPKTREDEV SNIIGTLRTG RYNEGVIIQM
101: ESEENNLDDG YSWKKYGQRL IMGNQNTRSY YKCTFAGCDV KKHVERRADN VKLLVITYYG NHEHDAPVQR RKCYSLKKRS GSSMFQDASN RTPRVNSSEG
201: ETV

Best Arabidopsis Sequence Match ( AT1G55600.1 )
(BLAST)

001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM

Arabidopsis Description

WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.