Factsheet for Bra037106.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08253	Canola	nucleus	96.06	99.76
CDY26094	Canola	nucleus	94.21	97.84
Bra030847.1-P	Field mustard	nucleus	53.47	51.68
Bra030848.1-P	Field mustard	nucleus	22.92	48.77
AT1G55600.1	Thale cress	nucleus	53.24	47.42
Bra038006.1-P	Field mustard	nucleus	51.16	33.79
Bra021623.1-P	Field mustard	nucleus	17.59	21.71
Bra028707.1-P	Field mustard	nucleus	15.97	21.63
Bra018325.1-P	Field mustard	nucleus	17.82	20.64
Bra005104.1-P	Field mustard	nucleus	20.83	19.69
Bra017117.1-P	Field mustard	nucleus	20.83	19.44
Bra022786.1-P	Field mustard	nucleus	16.67	19.05
Bra024780.1-P	Field mustard	nucleus	21.3	18.93
Bra026438.1-P	Field mustard	nucleus	23.38	18.91
Bra019105.1-P	Field mustard	nucleus	23.15	18.9
Bra000064.1-P	Field mustard	nucleus	20.6	18.82
Bra026554.1-P	Field mustard	nucleus	20.6	18.74
Bra016716.1-P	Field mustard	nucleus	20.14	18.71
Bra019697.1-P	Field mustard	nucleus	20.14	17.65
Bra028939.1-P	Field mustard	nucleus	18.06	17.37
Bra026869.1-P	Field mustard	nucleus	19.21	17.29
Bra002828.1-P	Field mustard	nucleus	26.85	17.24
KRH34226	Soybean	nucleus	12.04	15.48
Bra028971.1-P	Field mustard	nucleus	16.9	15.05
Bra023112.1-P	Field mustard	nucleus	14.12	14.52
Bra026414.1-P	Field mustard	nucleus	17.82	14.39
Bra005210.1-P	Field mustard	nucleus	13.43	14.18
Bra010431.1-P	Field mustard	nucleus	17.82	14.13
KRH34224	Soybean	nucleus	11.81	13.9
Bra013187.1-P	Field mustard	nucleus	13.66	13.2
Bra010266.1-P	Field mustard	nucleus	12.04	11.38
Bra019095.1-P	Field mustard	nucleus	16.9	9.68
Bra024035.1-P	Field mustard	nucleus	11.34	8.32

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra037106	EnsemblPlants:Bra037106.1	EnsemblPlants:Bra037106.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:M4F7P5	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00025476DA	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

AT1G55600 (E=1e-039) WRKY10, ATWRKY10, MINI3 | WRKY10 (WRKY DNA-BINDING PROTEIN 10); transcription factor

Coordinates

chrA05:+:10124567..10126456

Molecular Weight (calculated)

48028.9 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.651

Length

432 amino acids

Sequence
(BLAST)

001: MNAFDGTYRG VRTCWAAPSS PSPRSLLAML NQGDNNDVVD QINEIFPQAN HQPEQRSSLR ERVAARVEFN LPPLETQNNR PFAAFFRNPS TTVPSPLVLI
101: SPGFSPSAML QFPNTFIDPS HMILPSPVAN GGPPEAVESS GADHATMMIS NNDPMHVALP PQQDSVYIPS HVDSIDAPIV AAFESGPALN ETDLINMEID
201: RKNEDEEEYK EDEDEEHNIV DELDAEPSSP KRRKFGESTM IGATRSCKSQ RVILQMETEE NNPDDGFRWR KYGQKVVKGN PNPRSYYKCT YTACDVKKHV
301: ERGAEDVKFL LVTYDGIHEH DPPAARGSSS SGLKGQYSSS VSQDHNNHRT VPPSSSSASE ALRFFPSSLD PPVDMTQFYM TGLAKLPSLP VYQNHGLMNW
401: NNEPEIDRVI PDGTEVFKGI RDRLNLNFGL NL

Best Arabidopsis Sequence Match ( AT1G55600.1 )
(BLAST)

001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM

Arabidopsis Description

WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.