Factsheet for Bra016716.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96873	Canola	nucleus	96.34	96.14
CDY62213	Canola	nucleus	91.83	92.03
Bra019697.1-P	Field mustard	nucleus	85.38	80.53
Bra026869.1-P	Field mustard	nucleus	82.58	80.0
AT1G13960.1	Thale cress	nucleus	85.59	77.43
Bra026554.1-P	Field mustard	nucleus	67.1	65.68
Bra024780.1-P	Field mustard	nucleus	65.38	62.55
KRH70820	Soybean	nucleus, plastid	42.37	54.12
VIT_01s0011g00220.t01	Wine grape	nucleus	57.2	52.99
KRH74950	Soybean	nucleus	51.83	52.97
Solyc05g012770.2.1	Tomato	nucleus	57.2	52.36
PGSC0003DMT400072836	Potato	nucleus	56.56	51.77
KRG89512	Soybean	nucleus	48.6	51.48
KRH50544	Soybean	nucleus	46.88	49.32
Bra028707.1-P	Field mustard	nucleus	29.25	42.63
Bra021623.1-P	Field mustard	nucleus	29.25	38.86
Bra018325.1-P	Field mustard	nucleus	30.11	37.53
Bra022786.1-P	Field mustard	nucleus	28.17	34.66
Bra005104.1-P	Field mustard	nucleus	33.76	34.35
Bra017117.1-P	Field mustard	nucleus	32.9	33.05
Bra000064.1-P	Field mustard	nucleus	33.33	32.77
Bra005210.1-P	Field mustard	nucleus	26.67	30.32
Bra023112.1-P	Field mustard	nucleus	26.67	29.52
Bra028971.1-P	Field mustard	nucleus	30.75	29.48
Bra028939.1-P	Field mustard	nucleus	28.39	29.4
Bra026414.1-P	Field mustard	nucleus	33.33	28.97
Bra010431.1-P	Field mustard	nucleus	33.33	28.44
Bra019105.1-P	Field mustard	nucleus	31.18	27.41
Bra026438.1-P	Field mustard	nucleus	30.97	26.97
Bra030848.1-P	Field mustard	nucleus	11.61	26.6
Bra002828.1-P	Field mustard	nucleus	36.77	25.41
Bra013187.1-P	Field mustard	nucleus	22.58	23.49
Bra010266.1-P	Field mustard	nucleus	21.29	21.66
Bra030847.1-P	Field mustard	nucleus	19.78	20.58
Bra037106.1-P	Field mustard	nucleus	18.71	20.14
Bra019095.1-P	Field mustard	nucleus	32.04	19.76
Bra024035.1-P	Field mustard	nucleus	22.37	17.66
Bra038006.1-P	Field mustard	nucleus	16.56	11.77

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra016716	EnsemblPlants:Bra016716.1	EnsemblPlants:Bra016716.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DJN8	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002545C82	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G03340 (E=1e-102) WRKY3 | WRKY3; transcription factor

Coordinates

chrA08:-:19650234..19652179

Molecular Weight (calculated)

50301.6 Da

IEP (calculated)

8.659

GRAVY (calculated)

-0.723

Length

465 amino acids

Sequence
(BLAST)

001: MSEKAELPST SNSTGAPSRP TLSLLPRPFT ETFFNGGVGF SPGPMTLVSN MFSDSDESSR SFSQLLAGVV MPSPATGSEG NSNSSSSSVD VVDPRFKQSR
101: PTGLMVSQSP SVFTVPPGLS PAMLLDSPSF LGLISPLQGS YGMTHQQALA QVTTQAVQAN ANMQPPSSQV RSQNPTSAPD SSLLAQRETS DITIMEHRSQ
201: QPLNVDKPAV DGYNWRKYGQ KQVKGSEFPR SYYKCTSPGC PVKKKVERSL DGQVTEIIYK GQHNHEPPQN TKRGNKDSLH GSLINNNPNK TTREQHEAAS
301: QATTEQMSEA SDSEEVGNGD TGVRDEPDAK RRVLEPAAAV AASHRTVAEP RIIVQTTSEV DLLDDGYRWR KYGQKIVKGN PYPRSYYKCT TQGCGVRKHV
401: ERAATDPKAV VTTYEGKHNH DPPAAKSSSH AAAAAAQLRH GGLANLNQQQ QQPVACLRLK EEQTI

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.