CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00834
KRH06592
KRH40392
KRH43402
KRH48074
KRH50176
KRH53873
KRH59551
KRH64076
KRH71277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30250.1	KRH50176	AT2G43790.1	15990873
AT2G30250.1	KRH71277	AT2G43790.1	15990873
AT2G30250.1	KRH43402	AT3G18690.1	15990873
AT2G30250.1	KRH53873	AT3G18690.1	15990873
AT2G30250.1	KRH59551	AT3G18690.1	15990873
AT2G30250.1	KRH64076	AT3G18690.1	15990873
AT2G30250.1	KRH00834	AT4G01370.1	15990873
AT2G30250.1	KRH06592	AT4G01370.1	15990873
AT2G30250.1	KRH40392	AT4G01370.1	15990873
AT2G30250.1	KRH48074	AT4G01370.1	15990873

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40825	Soybean	nucleus	89.83	89.5
KRH65526	Soybean	nucleus	58.6	62.52
KRH76058	Soybean	nucleus	58.04	61.93
AT5G07100.1	Thale cress	nucleus	29.39	51.46
CDY05016	Canola	nucleus	29.57	50.16
Bra028707.1-P	Field mustard	nucleus	29.39	49.84
CDY14055	Canola	nucleus	28.84	48.9
KRH17125	Soybean	nucleus	49.91	46.96
KRH72765	Soybean	nucleus	49.91	46.55
CDY29685	Canola	nucleus	29.76	46.0
Bra021623.1-P	Field mustard	nucleus	29.76	46.0
KRG98195	Soybean	nucleus	45.84	45.76
Bra018325.1-P	Field mustard	nucleus	31.05	45.04
CDX97834	Canola	nucleus	29.94	44.88
CDY10720	Canola	nucleus	30.87	44.77
KRH30155	Soybean	nucleus	44.73	44.16
CDY24017	Canola	nucleus	30.31	43.39
CDX84848	Canola	nucleus	30.13	43.12
Os05t0343400-01	Rice	nucleus	38.82	43.12
TraesCS1A01G070400.1	Wheat	nucleus	34.57	42.5
Bra022786.1-P	Field mustard	nucleus	29.57	42.33
AT2G30250.1	Thale cress	nucleus	30.13	41.48
Zm00001d038023_P001	Maize	nucleus	36.97	40.9
CDY02051	Canola	nucleus	20.89	40.79
TraesCS1D01G072900.1	Wheat	nucleus	34.75	40.52
TraesCS1B01G088900.2	Wheat	nucleus	34.2	40.39
Zm00001d010399_P001	Maize	nucleus	36.41	39.56
KXG21728	Sorghum	nucleus	37.34	39.07
KRH70820	Soybean	nucleus, plastid	25.69	38.19
KRH34225	Soybean	nucleus	13.31	37.5
KRH55277	Soybean	nucleus	14.42	36.79
KRH74950	Soybean	nucleus	26.99	32.09
KRH44949	Soybean	nucleus	30.5	31.55
KRH01236	Soybean	nucleus	30.13	31.35
KRG89512	Soybean	nucleus	25.32	31.21
KRH14276	Soybean	nucleus	33.27	30.77
KRH50544	Soybean	nucleus	24.95	30.54
KRH46302	Soybean	nucleus	32.35	30.33
KRH67621	Soybean	nucleus	24.95	30.13
KRH73864	Soybean	nucleus	32.72	30.1
KRG98564	Soybean	nucleus	31.79	29.81
KRG95903	Soybean	nucleus	25.69	29.51
KRH49522	Soybean	extracellular, plasma membrane	13.49	28.97
KRH62550	Soybean	nucleus	36.78	26.15
KRH56379	Soybean	nucleus	36.41	25.39
KRH03056	Soybean	nucleus	5.18	23.73
KRH40304	Soybean	nucleus	32.16	23.71
KRH74020	Soybean	nucleus	22.18	23.67
KRH00919	Soybean	nucleus	32.16	23.39
KRH34226	Soybean	nucleus	14.23	22.92
KRH14103	Soybean	nucleus	21.26	22.64
KRH26105	Soybean	nucleus	18.11	20.98
KRH54934	Soybean	nucleus	17.01	19.57
KRH72303	Soybean	nucleus	17.56	17.82
KRH34224	Soybean	nucleus	12.01	17.71
KRH03057	Soybean	nucleus	12.2	17.1

Protein Annotations

EntrezGene:100792833	MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	EMBL:ACUP02011438	EnsemblPlantsGene:GLYMA_18G208800
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1N342
InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:KRH00362	ProteinID:KRH00362	ProteinID:KRH00362.1	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00023D8ACB
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:49342180..49344647

Molecular Weight (calculated)

60516.1 Da

IEP (calculated)

8.075

GRAVY (calculated)

-1.009

Length

541 amino acids

Sequence
(BLAST)

001: MGDHSNWETS ELSHNNHHQN HQVGLDVLKF KSVQPPSLPL SPSPVSPSSY LNFSSAFSPS ELLNSPLFFP SPNIFASPTT EALVGQSFNW RNGSGEEQQR
101: GKEDEKNYSD FSFQTQIQSS LNMFQVQEPL KKQDMWKFNE PTKQSDFSSE RTATKSEYPS IQKFSSEMAA GKPEIQSNSV PGSGYFDYTS ASLSVREQKR
201: AEDGFNWRKY GQKQVKGSEN PRSYYKCTHP NCSVKKKVEK TLEGQITEIV YKGQHNHPKL QSTRRTNSQS INQPSSSCTN SGISDQSVVT LGNPQMDHFS
301: IQEDSSASVG EENFEQTSQT SYSGGDEDNL GPDAKRWKED NKNDGYSVSG SRTVREPRVV VQTTSEIDIL DDGFRWRKYG QKVVKGNPNA RSYYKCTAPG
401: CSVRKHVERA AHDIKAVITT YEGKHNHDVP AARGSGNYYM NRNSLNSSIP APIRPSAVNC YSNSSSFTNS LYNNTRHPAT GNQESCSLDK FKNPGSFGYS
501: ALNRSMSSHT DQAQYTDAAH SKAKDERKDD SFLQSFLSKD Y

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.