Factsheet for Zm00001d038023_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003743_P001
Zm00001d016748_P001
Zm00001d025374_P001
Zm00001d034979_P001
Zm00001d036215_P003
Zm00001d045310_P003
Zm00001d047349_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30250.1	Zm00001d036215_P003	AT2G43790.1	15990873
AT2G30250.1	Zm00001d045310_P003	AT2G43790.1	15990873
AT2G30250.1	Zm00001d003743_P001	AT3G18690.1	15990873
AT2G30250.1	Zm00001d016748_P001	AT3G18690.1	15990873
AT2G30250.1	Zm00001d025374_P001	AT3G18690.1	15990873
AT2G30250.1	Zm00001d034979_P001	AT3G18690.1	15990873
AT2G30250.1	Zm00001d047349_P001	AT4G01370.1	15990873

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010399_P001	Maize	nucleus	86.09	84.54
KXG21728	Sorghum	nucleus	87.32	82.59
Os05t0343400-01	Rice	nucleus	72.39	72.69
TraesCS1A01G070400.1	Wheat	nucleus	64.01	71.14
TraesCS1D01G072900.1	Wheat	nucleus	66.67	70.26
TraesCS1B01G088900.2	Wheat	nucleus	65.03	69.43
AT5G07100.1	Thale cress	nucleus	35.17	55.66
CDY05016	Canola	nucleus	35.99	55.17
Bra028707.1-P	Field mustard	nucleus	35.79	54.86
CDY14055	Canola	nucleus	34.56	52.98
CDY29685	Canola	nucleus	33.74	47.14
Bra021623.1-P	Field mustard	nucleus	33.54	46.86
Bra018325.1-P	Field mustard	nucleus	35.58	46.65
CDY10720	Canola	nucleus	35.17	46.11
CDX97834	Canola	nucleus	33.95	45.98
CDY24017	Canola	nucleus	33.95	43.92
AT2G30250.1	Thale cress	nucleus	35.17	43.77
CDY02051	Canola	nucleus	24.74	43.68
CDX84848	Canola	nucleus	33.74	43.65
Bra022786.1-P	Field mustard	nucleus	33.74	43.65
Zm00001d043025_P001	Maize	nucleus	47.44	41.8
Zm00001d038451_P001	Maize	nucleus	44.38	38.96
Zm00001d012482_P001	Maize	nucleus	45.81	37.77
KRH00362	Soybean	nucleus	40.9	36.97
KRH40825	Soybean	nucleus	40.9	36.83
KRH76058	Soybean	nucleus	37.22	35.9
KRH65526	Soybean	nucleus	37.22	35.9
Zm00001d034084_P001	Maize	nucleus	26.79	30.75
Zm00001d041740_P001	Maize	nucleus	30.88	30.57
Zm00001d035323_P001	Maize	nucleus	30.67	30.24
Zm00001d047309_P001	Maize	nucleus	29.86	29.38
Zm00001d006702_P001	Maize	nucleus	34.97	28.03
Zm00001d021947_P002	Maize	nucleus	34.56	27.57
Zm00001d025669_P001	Maize	nucleus	34.15	25.19
Zm00001d029564_P001	Maize	nucleus	18.4	23.87
Zm00001d003331_P001	Maize	nucleus	33.95	23.61
Zm00001d052847_P001	Maize	nucleus	34.36	23.05
Zm00001d020881_P002	Maize	nucleus	27.61	22.92
Zm00001d006001_P006	Maize	nucleus	26.79	22.82
Zm00001d050023_P001	Maize	extracellular	24.54	21.2

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	UniProt:A0A1D6M2S4	ProteinID:AQK85483.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI0000F52F22	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d038023	EnsemblPlants:Zm00001d038023_P001	EnsemblPlants:Zm00001d038023_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 83Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr6:-:145529821..145531626

Molecular Weight (calculated)

51505.5 Da

IEP (calculated)

8.094

GRAVY (calculated)

-0.672

Length

489 amino acids

Sequence
(BLAST)

001: MASSTGSLEH GGFTFTPPPF ITSFTELLSG AAADMVGAAG ADHQERSPRG LFHRGATRGG GVGVPKFKSA QPPSLPISPP PMSPSSYFSI PPGLSPAELL
101: DSPVLLHSSS NFFASPTTGA IPAQRFDWKH AADLIASQSQ QDDSRAAVGS AFNDFSFHAP TMPAQTTSFP SFKEQQQQQV EAATKSAVPS SNKASGGGGG
201: TKLEDGYNWR KYGQKQVKGS ENPRSYYKCT YHSCSMKKKV ERSLADGRVT QIVYKGAHNH PKPLSTRRNS SGGVAAAEEQ AANNSSLSGC GGPEHSGGAT
301: AENSSVTFGD DEAENGSQRS GGDEPDAKRW KAEDGENEGS SGAGGGKPVR EPRLVVQTLS DIDILDDGFR WRKYGQKVVK GNPNPRSYYK CTTAGCPVRK
401: HVERACHDAR AVITTYEGKH NHDVPVGRGA ASRAAAAAPL LGSGGGQMDH RHQQPYTLEM LSGGGGGYGG GYAAKDEPRD DLFVDSLLC

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.