Factsheet for Zm00001d038451_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003743_P001
Zm00001d016748_P001
Zm00001d025374_P001
Zm00001d034979_P001
Zm00001d047349_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38470.1	Zm00001d003743_P001	AT3G18690.1	15990873
AT2G38470.1	Zm00001d016748_P001	AT3G18690.1	15990873
AT2G38470.1	Zm00001d025374_P001	AT3G18690.1	15990873
AT2G38470.1	Zm00001d034979_P001	AT3G18690.1	15990873
AT2G38470.1	Zm00001d003743_P001	AT3G18690.1	18650934
AT2G38470.1	Zm00001d016748_P001	AT3G18690.1	18650934
AT2G38470.1	Zm00001d025374_P001	AT3G18690.1	18650934
AT2G38470.1	Zm00001d034979_P001	AT3G18690.1	18650934
AT2G38470.1	Zm00001d003743_P001	AT3G18690.1	21203436
AT2G38470.1	Zm00001d016748_P001	AT3G18690.1	21203436
AT2G38470.1	Zm00001d025374_P001	AT3G18690.1	21203436
AT2G38470.1	Zm00001d034979_P001	AT3G18690.1	21203436
AT2G38470.1	Zm00001d047349_P001	AT4G01370.1	18650934

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78174	Sorghum	nucleus	66.43	57.01
TraesCS1D01G292700.1	Wheat	nucleus, plastid	50.45	55.42
TraesCS1A01G298600.1	Wheat	nucleus, plastid	49.91	55.05
HORVU1Hr1G070250.2	Barley	nucleus, plastid	50.27	54.69
TraesCS1B01G308200.1	Wheat	nucleus, plastid	49.55	54.22
Os05t0474800-01	Rice	nucleus	53.86	52.45
Zm00001d043025_P001	Maize	nucleus	51.71	51.89
GSMUA_Achr3P09940_001	Banana	nucleus	33.21	50.55
Zm00001d012482_P001	Maize	nucleus	50.81	47.72
PGSC0003DMT400043204	Potato	nucleus	43.99	45.88
Solyc06g066370.2.1	Tomato	nucleus	43.81	45.61
KRH17125	Soybean	nucleus	46.14	44.7
KRH72765	Soybean	nucleus	46.5	44.66
Zm00001d038023_P001	Maize	nucleus	38.96	44.38
GSMUA_Achr6P32720_001	Banana	nucleus	36.09	44.08
Bra005104.1-P	Field mustard	nucleus	36.09	43.98
KRG98195	Soybean	nucleus	42.01	43.17
CDY65564	Canola	nucleus, plastid	36.27	42.89
Zm00001d010399_P001	Maize	nucleus	38.24	42.77
VIT_06s0004g07500.t01	Wine grape	nucleus	46.14	42.62
Bra017117.1-P	Field mustard	nucleus	35.37	42.55
CDX91470	Canola	nucleus, plastid	36.27	42.44
KRH30155	Soybean	nucleus	41.65	42.34
Bra000064.1-P	Field mustard	nucleus	35.73	42.07
CDY07729	Canola	nucleus	35.73	42.07
CDY69941	Canola	nucleus, plastid	35.73	41.72
CDY18383	Canola	nucleus, plastid	35.91	41.58
CDY14459	Canola	nucleus, plastid	36.09	41.02
AT2G38470.1	Thale cress	nucleus, plastid	37.16	39.88
CDY48650	Canola	nucleus, plastid	28.37	35.67
GSMUA_Achr8P01790_001	Banana	nucleus	35.19	34.39
Zm00001d034084_P001	Maize	nucleus	23.52	30.75
Zm00001d035323_P001	Maize	nucleus	26.03	29.23
Zm00001d041740_P001	Maize	nucleus	25.85	29.15
Zm00001d006702_P001	Maize	nucleus	29.98	27.38
Zm00001d021947_P002	Maize	nucleus	29.8	27.08
Zm00001d047309_P001	Maize	nucleus	22.62	25.35
Zm00001d025669_P001	Maize	nucleus	29.8	25.04
Zm00001d003331_P001	Maize	nucleus	30.52	24.18
Zm00001d052847_P001	Maize	nucleus	29.26	22.36
Zm00001d006001_P006	Maize	nucleus	21.9	21.25
Zm00001d020881_P002	Maize	nucleus	22.08	20.88
Zm00001d050023_P001	Maize	extracellular	20.83	20.49
Zm00001d029564_P001	Maize	nucleus	12.57	18.57

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6M6E6	ProteinID:AQK86652.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF76	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000842D676
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d038451	EnsemblPlants:Zm00001d038451_P001	EnsemblPlants:Zm00001d038451_T001	SEG:seg

Description

WRKY-transcription factor 57Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr6:-:157439807..157442871

Molecular Weight (calculated)

59821.9 Da

IEP (calculated)

5.941

GRAVY (calculated)

-0.668

Length

557 amino acids

Sequence
(BLAST)

001: MTSTTPGTFG TLANSGPVAL SFPTTTSFAS FLGGGSSPSR IMDSGGGVGL SKFKAMTPPS LPLSSSCPPP PQSYLHAFSG LLDSPILLTP SLFPSPTTGA
101: IPSEPFNWMG TAENDLSGSG VEAEQRQQYT DFAFQTAAAA TSTIITDVDP VHAWPDCRNP SQIQYDIGRV GDSYSGEMLQ QQPWTYQEPT AQFEAPAAQA
201: GNMFGTGGGY GAAPGFREQR QSHRPSSDDG YNWRKYGQKQ MKGSENPRSY YKCSFPGCPT KKKVEQSPDG QVTEIVYKGT HNHPKPQSTR RGASSAPASY
301: VVQSASDAVM PEHSWGALSG TPVVTPENSS GSFGGDGDEV NGMSSRLGGS FGADDLDDDE PDSKRWRKDG GDADAAGCSV SVASNNRTVR EPRVVVQTMS
401: DIDVLDDGYR WRKYGQKVVK GNPNPRSYYK CTGAGCLVRK HVERACHDTC AVVTTYEGKH NHDVPPARGS ASLYRAALAA QMPPQQAASY QGAPMPAAER
501: GSFALSGFGD PVGTAYSYYT NHHQEQEQQQ QQPNQAMRYA KDEPQDCMSF FEQQLLF

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.