Factsheet for PGSC0003DMT400043204

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g066370.2.1	Tomato	nucleus	97.57	97.38
KRH17125	Soybean	nucleus	61.42	57.04
KRH72765	Soybean	nucleus	61.8	56.9
GSMUA_Achr3P09940_001	Banana	nucleus	38.58	56.28
VIT_06s0004g07500.t01	Wine grape	nucleus	63.3	56.05
KRG98195	Soybean	nucleus	54.87	54.06
KRH30155	Soybean	nucleus	54.87	53.47
GSMUA_Achr6P32720_001	Banana	nucleus	44.76	52.41
GSMUA_Achr11P...	Banana	nucleus	44.76	51.29
PGSC0003DMT400030388	Potato	nucleus	37.83	49.51
PGSC0003DMT400046529	Potato	endoplasmic reticulum, vacuole	14.23	47.2
KXG33637	Sorghum	nucleus	47.57	45.68
Zm00001d043025_P001	Maize	nucleus	47.38	45.59
Os01t0826400-01	Rice	extracellular	46.82	45.05
TraesCS1A01G298600.1	Wheat	nucleus, plastid	41.76	44.16
TraesCS3B01G379200.1	Wheat	nucleus	46.07	44.01
Zm00001d038451_P001	Maize	nucleus	45.88	43.99
HORVU1Hr1G070250.2	Barley	nucleus, plastid	41.95	43.75
TraesCS3D01G341100.1	Wheat	nucleus	45.88	43.67
TraesCS1B01G308200.1	Wheat	nucleus, plastid	41.57	43.61
TraesCS1D01G292700.1	Wheat	nucleus, plastid	41.39	43.59
TraesCS3A01G347500.1	Wheat	nucleus	45.69	43.42
Zm00001d012482_P001	Maize	nucleus	45.51	40.98
HORVU3Hr1G088200.4	Barley	nucleus, plastid	45.51	40.57
Os05t0474800-01	Rice	nucleus	42.88	40.03
GSMUA_Achr8P01790_001	Banana	nucleus	42.7	40.0
OQU78174	Sorghum	nucleus	45.13	37.13
PGSC0003DMT400003637	Potato	nucleus	28.65	33.92
PGSC0003DMT400072836	Potato	nucleus	32.21	33.86
PGSC0003DMT400076670	Potato	nucleus	36.7	32.08
PGSC0003DMT400014220	Potato	nucleus	30.9	31.98
PGSC0003DMT400060042	Potato	nucleus	27.15	31.73
PGSC0003DMT400057409	Potato	nucleus	34.46	30.87
PGSC0003DMT400056952	Potato	nucleus	40.45	28.88
PGSC0003DMT400028530	Potato	nucleus	25.09	28.69
PGSC0003DMT400015754	Potato	nucleus	21.91	27.73
PGSC0003DMT400074158	Potato	nucleus	24.91	24.23
PGSC0003DMT400029328	Potato	nucleus	30.15	23.1
PGSC0003DMT400029069	Potato	mitochondrion	5.24	22.95

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	EMBL:AB192884	EMBL:AB445390	ProteinID:BAE46417
ProteinID:BAE46417.2	ProteinID:BAI63294	ProteinID:BAI63294.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:M1BE91	PFAM:PF03106
EnsemblPlantsGene:PGSC0003DMG400016769	PGSC:PGSC0003DMG400016769	EnsemblPlants:PGSC0003DMT400043204	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000296BFB2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Double WRKY type transfactor [Source:PGSC_GENE;Acc:PGSC0003DMG400016769]

Coordinates

chr6:-:45149200..45151981

Molecular Weight (calculated)

59576.9 Da

IEP (calculated)

7.398

GRAVY (calculated)

-1.076

Length

534 amino acids

Sequence
(BLAST)

001: MAASSFSFPT SSSSFMTTSF TDLLASDDYP TKGLGDRIAE RTGSGVPKFK SLPPPSLPLS PPPFSPSSYF AIPPGLSPTE LLDSPVLLSS SNLLPSPTTG
101: SFPSHAFNWK SSSHRDVKQE DKNYSDFSFQ PQVGTAASIS QSQTNHVPLG QQAWNYQEPT KQNDQNANGR SEFNTLQSFM QNNNDQNNSG NQYNQSIREQ
201: KRSDDGYNWR KYGQKQVKGS ENPRSYYKCT YPNCPTKKKV ERSLDGQITE IVYKGNHNHP KPQSTRRSSS STASSAIQSY NTQTNEIPDH QSYGSNGQMD
301: SVATPENSSI SFGDDDHEHT SQKSSRSRGD DLDEEEPDSK RWKRENESEG LSALGGSRTV REPRVVVQTT SDIDILDDGY RWRKYGQKVV KGNPNPRSYY
401: KCTSTGCPVR KHVERASQDI RSVITTYEGK HNHDVPAARG SGNHSINRPM APTVRPTVTS HQSNYQVPLQ SIRPQQSEMG APYTLEMLQR PNNYGISGYA
501: NSGDSYENQV QDNNVFSRTK DEPRDDMFME SLLC

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.