Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d028711_P003 | |
| Zm00001d036215_P003 | |
| Zm00001d045310_P003 | |
| Zm00001d047758_P003 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025669_P001 | Maize | nucleus | 75.82 | 80.39 |
| KXG26525 | Sorghum | nucleus | 82.5 | 78.38 |
| TraesCS2B01G351600.1 | Wheat | nucleus | 63.58 | 61.23 |
| TraesCS2D01G332300.1 | Wheat | nucleus | 63.02 | 60.27 |
| HORVU0Hr1G004890.10 | Barley | nucleus | 51.49 | 60.13 |
| TraesCS2A01G330500.1 | Wheat | nucleus | 62.59 | 59.86 |
| GSMUA_Achr5P23900_001 | Banana | nucleus | 36.42 | 45.31 |
| Bra028939.1-P | Field mustard | nucleus | 28.16 | 44.1 |
| GSMUA_Achr6P03500_001 | Banana | nucleus | 31.72 | 43.3 |
| GSMUA_Achr4P01600_001 | Banana | nucleus | 40.26 | 42.49 |
| CDY11947 | Canola | nucleus | 34.0 | 41.64 |
| GSMUA_Achr11P... | Banana | nucleus | 38.26 | 41.58 |
| GSMUA_Achr5P04150_001 | Banana | nucleus | 37.41 | 41.55 |
| CDY36788 | Canola | nucleus | 36.13 | 40.71 |
| CDY49388 | Canola | nucleus | 37.27 | 39.05 |
| Bra002828.1-P | Field mustard | nucleus | 37.27 | 38.93 |
| CDX94335 | Canola | nucleus | 27.6 | 37.74 |
| Bra026438.1-P | Field mustard | nucleus | 28.31 | 37.27 |
| Zm00001d006001_P006 | Maize | nucleus | 30.3 | 37.11 |
| CDX89336 | Canola | nucleus | 28.16 | 37.08 |
| Os04t0471700-00 | Rice | nucleus | 52.35 | 36.87 |
| CDY69527 | Canola | nucleus | 28.45 | 36.83 |
| AT5G56270.1 | Thale cress | nucleus | 35.99 | 36.83 |
| CDY42736 | Canola | nucleus | 27.6 | 36.67 |
| Bra019105.1-P | Field mustard | nucleus | 27.6 | 36.67 |
| Zm00001d020881_P002 | Maize | nucleus | 30.58 | 36.5 |
| AT4G26440.1 | Thale cress | nucleus | 29.45 | 36.44 |
| CDY32799 | Canola | nucleus | 30.58 | 35.77 |
| Zm00001d038023_P001 | Maize | nucleus | 23.61 | 33.95 |
| Zm00001d010399_P001 | Maize | nucleus | 23.61 | 33.33 |
| Zm00001d052847_P001 | Maize | nucleus | 34.42 | 33.2 |
| Zm00001d041740_P001 | Maize | nucleus | 22.76 | 32.39 |
| Zm00001d043025_P001 | Maize | nucleus | 25.46 | 32.25 |
| Zm00001d035323_P001 | Maize | nucleus | 22.62 | 32.06 |
| VIT_19s0015g01870.t01 | Wine grape | nucleus | 32.57 | 30.7 |
| Zm00001d021947_P002 | Maize | nucleus | 26.74 | 30.67 |
| Zm00001d038451_P001 | Maize | nucleus | 24.18 | 30.52 |
| Zm00001d034084_P001 | Maize | nucleus | 18.49 | 30.52 |
| Zm00001d006702_P001 | Maize | nucleus | 26.32 | 30.33 |
| Zm00001d047309_P001 | Maize | nucleus | 21.34 | 30.18 |
| Zm00001d012482_P001 | Maize | nucleus | 25.18 | 29.85 |
| KRH62550 | Soybean | nucleus | 32.29 | 29.83 |
| KRH56379 | Soybean | nucleus | 31.86 | 28.87 |
| PGSC0003DMT400029328 | Potato | nucleus | 24.47 | 24.68 |
| Zm00001d029564_P001 | Maize | nucleus | 12.52 | 23.34 |
| Solyc10g005680.1.1 | Tomato | nucleus | 23.04 | 23.04 |
| Zm00001d050023_P001 | Maize | extracellular | 16.36 | 20.32 |
Protein Annotations
| EntrezGene:100383070 | MapMan:15.5.22 | Gene3D:2.20.25.80 | EMBL:BT066094 | UniProt:C0PCS5 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| EMBL:KJ728172 | ProteinID:ONM16775.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF86 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000194B3C1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d003331 |
| EnsemblPlants:Zm00001d003331_P001 | EnsemblPlants:Zm00001d003331_T001 | SEG:seg | : | : | : |
Description
WRKY-transcription factor 72Probable WRKY transcription factor 34
Coordinates
chr2:+:40361661..40367040
Molecular Weight (calculated)
74821.5 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.629
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGHVAMEWN DPNPGPESLT SFQTEAVRPD TAGGHSNDDV EAGFEKHGLA VTVRPPEEEA RSVPLTPQLG QKSSPGSSLA ERMQARAGFM VSKLNMPFST
101: AAGADNSVPE VPSPYLTIPP GLSPATLLES PVFVSNSMGQ ASPTTGTLFM FGSTNDNDPI RFGGGPPSVG DGPNAFPFKP LDLKSSHYTA EAMKEQNTKS
201: SVKTETKILT VQEASLLSQL NQLNHNSQTI INSGGPHDPK LSRPASGAGA GNEHISPPDH GQTAEESDAR EDYPAMATTT PAEDGYSWRK YGQKQVKHSE
301: YPRSYFKCTH PNCLVKKKVE RSHEGHITEI IYKGAHNHPK PTQSRRPGVQ PVHPFGDSAQ ADAADNLGSQ ANALDANQPR RAGVQDGMDA TSSPSVPIER
401: CDSPASMQVD SATRFGSPEG ADVTSVSDEV GGDDRVTRGS MSQGGADAEG DELECKRRKL ESYAIDMSTA SRAVREPRVV IQTTSEVDIL DDGYRWRKYG
501: QKVVKGNPNP RSYYKCTYPG CVVRKHVERA SHDLKSVITT YEGRHNHEVP AARNSGHPGT AAATGAGGPR RLEHPSLRDG LMGHLGGCGV PFGLPPPRDP
601: LAPMGNYPTY ASSIPLGGAG PTSLPSLPVP AGTLSAVDGL KLPMLAPSSL QQHPLLRHRQ AMQAAGLVAP KDDVKVEGNV AGGAAPSVYQ QMMCSGLRLR
701: QQM
101: AAGADNSVPE VPSPYLTIPP GLSPATLLES PVFVSNSMGQ ASPTTGTLFM FGSTNDNDPI RFGGGPPSVG DGPNAFPFKP LDLKSSHYTA EAMKEQNTKS
201: SVKTETKILT VQEASLLSQL NQLNHNSQTI INSGGPHDPK LSRPASGAGA GNEHISPPDH GQTAEESDAR EDYPAMATTT PAEDGYSWRK YGQKQVKHSE
301: YPRSYFKCTH PNCLVKKKVE RSHEGHITEI IYKGAHNHPK PTQSRRPGVQ PVHPFGDSAQ ADAADNLGSQ ANALDANQPR RAGVQDGMDA TSSPSVPIER
401: CDSPASMQVD SATRFGSPEG ADVTSVSDEV GGDDRVTRGS MSQGGADAEG DELECKRRKL ESYAIDMSTA SRAVREPRVV IQTTSEVDIL DDGYRWRKYG
501: QKVVKGNPNP RSYYKCTYPG CVVRKHVERA SHDLKSVITT YEGRHNHEVP AARNSGHPGT AAATGAGGPR RLEHPSLRDG LMGHLGGCGV PFGLPPPRDP
601: LAPMGNYPTY ASSIPLGGAG PTSLPSLPVP AGTLSAVDGL KLPMLAPSSL QQHPLLRHRQ AMQAAGLVAP KDDVKVEGNV AGGAAPSVYQ QMMCSGLRLR
701: QQM
001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI
Arabidopsis Description
WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.