Factsheet for Zm00001d052847_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d028711_P003
Zm00001d036215_P003
Zm00001d045310_P003
Zm00001d047758_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	Zm00001d036215_P003	AT2G43790.1	24830428
AT4G26440.1	Zm00001d045310_P003	AT2G43790.1	24830428
AT4G26440.1	Zm00001d028711_P003	AT3G45640.1	24830428
AT4G26440.1	Zm00001d047758_P003	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80981	Sorghum	nucleus	73.94	78.69
Os08t0499300-01	Rice	nucleus	54.46	58.9
TraesCS7D01G239800.2	Wheat	nucleus	45.82	53.18
TraesCS7B01G136400.2	Wheat	nucleus, plastid	44.72	51.5
HORVU7Hr1G049130.1	Barley	nucleus, plastid	17.28	51.43
TraesCS7A01G240800.1	Wheat	nucleus	45.54	51.0
Zm00001d006001_P006	Maize	nucleus	38.55	48.95
Zm00001d020881_P002	Maize	nucleus	38.0	47.03
GSMUA_Achr5P23900_001	Banana	nucleus	33.61	43.36
GSMUA_Achr6P03500_001	Banana	nucleus	30.18	42.72
Bra028939.1-P	Field mustard	nucleus	26.06	42.32
GSMUA_Achr4P01600_001	Banana	nucleus	37.86	41.44
GSMUA_Achr5P04150_001	Banana	nucleus	35.12	40.44
CDY11947	Canola	nucleus	31.69	40.24
GSMUA_Achr11P...	Banana	nucleus	35.12	39.57
CDY36788	Canola	nucleus	33.47	39.1
CDX94335	Canola	nucleus	27.43	38.91
Bra002828.1-P	Field mustard	nucleus	35.67	38.63
CDY49388	Canola	nucleus	35.39	38.45
Bra026438.1-P	Field mustard	nucleus	27.85	38.02
CDX89336	Canola	nucleus	27.71	37.83
AT5G56270.1	Thale cress	nucleus	35.53	37.7
CDY69527	Canola	nucleus	27.16	36.46
CDY42736	Canola	nucleus	26.34	36.29
Bra019105.1-P	Field mustard	nucleus	26.34	36.29
AT4G26440.1	Thale cress	nucleus	28.12	36.09
CDY32799	Canola	nucleus	29.49	35.77
Zm00001d025669_P001	Maize	nucleus	32.24	35.44
Zm00001d003331_P001	Maize	nucleus	33.2	34.42
Zm00001d038023_P001	Maize	nucleus	23.05	34.36
Zm00001d010399_P001	Maize	nucleus	22.91	33.53
VIT_19s0015g01870.t01	Wine grape	nucleus	32.37	31.64
Zm00001d043025_P001	Maize	nucleus	23.73	31.17
Zm00001d035323_P001	Maize	nucleus	20.71	30.44
Zm00001d041740_P001	Maize	nucleus	20.58	30.36
KRH62550	Soybean	nucleus	31.69	30.35
Zm00001d034084_P001	Maize	nucleus	17.7	30.28
KRH56379	Soybean	nucleus	31.55	29.64
Zm00001d047309_P001	Maize	nucleus	20.16	29.58
Zm00001d006702_P001	Maize	nucleus	24.55	29.34
Zm00001d038451_P001	Maize	nucleus	22.36	29.26
Zm00001d021947_P002	Maize	nucleus	24.55	29.2
Zm00001d012482_P001	Maize	nucleus	22.77	27.99
PGSC0003DMT400029328	Potato	nucleus	24.28	25.39
Solyc10g005680.1.1	Tomato	nucleus	23.32	24.18
Zm00001d029564_P001	Maize	nucleus	11.93	23.08
Zm00001d050023_P001	Maize	extracellular	15.78	20.32

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK58198.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K7UNB8	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000220ED99
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d052847	EnsemblPlants:Zm00001d052847_P001	EnsemblPlants:Zm00001d052847_T001	SEG:seg

Description

WRKY-transcription factor 87Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr4:-:202445149..202447772

Molecular Weight (calculated)

78738.9 Da

IEP (calculated)

7.342

GRAVY (calculated)

-0.679

Length

729 amino acids

Sequence
(BLAST)

001: MDDWMLPSPS PRTLMPSFFS EEFISTPFSN IFADDRGSKP QDENEDSNTC IGSGAHETSQ DVKCHRPQIE SNIFGVNQKP TSPGGLAERI AARAGFGVLK
101: IDISRVGSSG AAIRSPVTIP SGVSPRELLE SPVFLPNAIS QPSPTTGKLP FLMPNNFKST MLCGPEKSED HLHEDSAFSF QPFLRSKPPT LWTAKKGPSV
201: VHETGSLSKD SQEELNLHAN PAAATEHETE ESLVIRPKAC DSMFDNGHPS SPDEGPEQSE ENQNREDCSA PVTAPGEDGY NWRKYGQKQV KNSEHPRSYY
301: KCTHPSCPVK KKVERSVEGH VTEIVYRGSH THPLPLPSRR SSVPPTQLEC GSQSDGLENL SSKPGPAYHS AASQSQGIAP DGQFQDVHRE ALETKLSGSL
401: TTTEIADRPV MDVSSTLSSN ENGDRAVPPT NGRNEDETES KRRKMEASAA TNTTTNTGID MAAMASRASR EPRIVVQTTS EVDILDDGYR WRKYGQKVVK
501: GNPNPRSVPF LYQETNQVEF PVAERTHART RTLLLPARRS YYKCTYAGCS VRKHVERASN DLKSVITTYE GKHNHEVPAA RNSGNGHPSS GSTPAPPQGS
601: GGLHRRLEPP QVSIPRLSAA AAAAAAAAAY GSLSLRFPPQ LSAAPGGFSF GMLRPTGMAP SLGGFLPAQM PGRGLPMQGC AGLVLPRGEA KVVSPEQQSG
701: LPVANGNAAA TYQQQQQQLM ARWAQGHQM

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.