Factsheet for Zm00001d021947_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36569	Sorghum	nucleus	94.13	94.44
Zm00001d006702_P001	Maize	nucleus	90.05	90.49
Os07t0583700-01	Rice	nucleus	78.96	78.32
GSMUA_Achr4P13970_001	Banana	nucleus	45.51	54.39
GSMUA_Achr7P25840_001	Banana	nucleus	20.72	51.42
GSMUA_Achr3P29850_001	Banana	nucleus	47.8	50.87
VIT_19s0090g01720.t01	Wine grape	nucleus	43.88	45.59
KRG98564	Soybean	nucleus	42.58	45.23
KRH46302	Soybean	nucleus	42.41	45.06
KRH14276	Soybean	nucleus	42.41	44.44
CDY70490	Canola	nucleus	37.36	44.21
KRH73864	Soybean	nucleus	42.09	43.88
Bra028971.1-P	Field mustard	nucleus	34.58	43.71
CDX92808	Canola	nucleus	36.7	42.94
AT4G26640.2	Thale cress	nucleus	38.99	42.91
CDX97359	Canola	nucleus	37.36	42.64
Bra010431.1-P	Field mustard	nucleus	37.68	42.39
CDY14304	Canola	nucleus	37.68	42.23
CDX89317	Canola	nucleus	36.7	42.13
Bra026414.1-P	Field mustard	nucleus	36.54	41.87
CDX94303	Canola	nucleus	36.22	41.73
CDY46692	Canola	nucleus	35.56	41.52
Solyc12g014610.1.1	Tomato	nucleus	41.11	41.24
PGSC0003DMT400076670	Potato	nucleus	40.95	41.08
VIT_00s0463g00010.t01	Wine grape	nucleus	40.62	40.69
PGSC0003DMT400057409	Potato	nucleus	38.34	39.43
Solyc07g065260.2.1	Tomato	nucleus	38.01	39.09
TraesCS2A01G189700.1	Wheat	nucleus	37.68	37.75
TraesCS2B01G217400.2	Wheat	nucleus	37.52	37.46
HORVU2Hr1G036320.1	Barley	nucleus	36.87	36.75
TraesCS2D01G198100.4	Wheat	nucleus	37.19	35.74
KRH49522	Soybean	extracellular, plasma membrane	14.36	34.92
Zm00001d038023_P001	Maize	nucleus	27.57	34.56
VIT_12s0057g00550.t01	Wine grape	nucleus	22.35	33.99
Zm00001d010399_P001	Maize	nucleus	27.57	33.94
Zm00001d043025_P001	Maize	nucleus	28.22	31.17
CDX93073	Canola	nucleus	18.6	30.98
Zm00001d041740_P001	Maize	nucleus	24.8	30.77
Zm00001d035323_P001	Maize	nucleus	24.8	30.65
Zm00001d038451_P001	Maize	nucleus	27.08	29.8
Solyc12g006170.1.1	Tomato	nucleus	20.07	29.64
Solyc07g047960.2.1	Tomato	nucleus	19.9	29.54
Bra019095.1-P	Field mustard	nucleus	36.22	29.44
PGSC0003DMT400015754	Potato	nucleus	19.58	28.44
Zm00001d034084_P001	Maize	nucleus	19.25	27.7
Zm00001d025669_P001	Maize	nucleus	29.85	27.6
Zm00001d012482_P001	Maize	nucleus	26.59	27.49
Zm00001d047309_P001	Maize	nucleus	22.19	27.36
CDY50038	Canola	nucleus	19.41	27.29
Bra013187.1-P	Field mustard	nucleus	19.58	26.85
Zm00001d003331_P001	Maize	nucleus	30.67	26.74
KRH74020	Soybean	nucleus	21.37	25.84
KRH14103	Soybean	nucleus	21.37	25.79
AT2G04880.1	Thale cress	nucleus	19.58	24.64
Zm00001d052847_P001	Maize	nucleus	29.2	24.55
Zm00001d006001_P006	Maize	nucleus	22.51	24.04
PGSC0003DMT400074158	Potato	nucleus	21.04	23.5
Zm00001d020881_P002	Maize	nucleus	22.02	22.92
Zm00001d050023_P001	Maize	extracellular	18.43	19.96
Zm00001d029564_P001	Maize	nucleus	11.75	19.1

Protein Annotations

EntrezGene:100279793	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:B7ZZZ6	EMBL:BT054888	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EMBL:KJ727861	ProteinID:ONM59110.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00019172A6	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d021947
EnsemblPlants:Zm00001d021947_P002	EnsemblPlants:Zm00001d021947_T002	SEG:seg	:	:	:

Description

WRKY-transcription factor 1Probable WRKY transcription factor 20

Coordinates

chr7:-:166771846..166782537

Molecular Weight (calculated)

65880.6 Da

IEP (calculated)

6.543

GRAVY (calculated)

-0.746

Length

613 amino acids

Sequence
(BLAST)

001: MADSPNPSSG DLPAGAGCSP EKPVLADRRV SALAGAGARY KAMSPARLPI SREPCLTIPT GFSPGALLES PVLLNNFKVE PSPTTGTLSM AANMNKSTHP
101: DILPSPRDNS ADSGQEDGGS REFEFKPHLN SQSSATAVNN QNHHDIPMQN HGSNHASPSS NLMTENKPLC SRESSHTANV SSAPNQPVSI VCPSDNMPAE
201: VGTSEMHLIN SSENAAQETQ TENVAEKSAE DGYNWRKYGQ KHVKGSENPR SYYKCTHPNC EVKKLLERSL DGQITEVVYK GHHNHPKPQP NRRLAAGAVP
301: SSQAEERYDG VAPIEDKPSN IYSNLCNQAH SAGMVDNVPG PASDDDVDAG GGRPYPGDDS NDDDDLDSKR RKMESAGIDA ALMGKPNREP RVVVQTVSEV
401: DILDDGYRWR KYGQKVVKGN PNPRSYYKCT HTGCPVRKHV ERASHDPKSV ITTYEGKHNH EVPASRNASH EMSAAPMKPV VHPINSSMPG FGGMMRACDA
501: RAFNNQYSQA AESDTISLDL GVGISPNHSD ATNQMQPSVP EPMQYQMRHM APVYGSMGLP GMPVPAIPGN VVASSIYGSR EEKGNEGFTF KAAPLDRSAN
601: LCYSSAGNLV MGP

Best Arabidopsis Sequence Match ( AT4G26640.2 )
(BLAST)

001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP

Arabidopsis Description

WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.