Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
23758924
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89317 | Canola | nucleus | 96.43 | 96.07 |
| Bra026414.1-P | Field mustard | nucleus | 96.43 | 95.89 |
| CDX92808 | Canola | nucleus | 80.08 | 81.3 |
| CDX97359 | Canola | nucleus | 81.95 | 81.19 |
| CDY14304 | Canola | nucleus | 82.14 | 79.89 |
| AT4G26640.2 | Thale cress | nucleus | 83.27 | 79.53 |
| CDY46692 | Canola | nucleus | 78.38 | 79.43 |
| CDY70490 | Canola | nucleus | 60.34 | 61.97 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 54.14 | 48.81 |
| Solyc12g014610.1.1 | Tomato | nucleus | 50.94 | 44.35 |
| PGSC0003DMT400076670 | Potato | nucleus | 50.94 | 44.35 |
| Solyc07g065260.2.1 | Tomato | nucleus | 49.06 | 43.79 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 20.3 | 43.72 |
| PGSC0003DMT400057409 | Potato | nucleus | 48.68 | 43.46 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 41.35 | 42.88 |
| CDY05016 | Canola | nucleus | 25.38 | 42.32 |
| CDY14055 | Canola | nucleus | 25.38 | 42.32 |
| KRH49522 | Soybean | extracellular, plasma membrane | 18.61 | 39.29 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 41.54 | 38.37 |
| CDY29685 | Canola | nucleus | 24.62 | 37.43 |
| CDX97834 | Canola | nucleus | 25.19 | 37.12 |
| Os07t0583700-01 | Rice | nucleus | 42.86 | 36.89 |
| CDY10720 | Canola | nucleus | 25.75 | 36.73 |
| Zm00001d021947_P002 | Maize | nucleus | 41.73 | 36.22 |
| KXG36569 | Sorghum | nucleus | 41.54 | 36.17 |
| Zm00001d006702_P001 | Maize | nucleus | 41.17 | 35.9 |
| CDX84848 | Canola | nucleus | 24.81 | 34.92 |
| CDY24017 | Canola | nucleus | 24.62 | 34.66 |
| CDY36419 | Canola | nucleus | 29.51 | 34.51 |
| CDY53941 | Canola | nucleus | 28.38 | 34.32 |
| CDX98138 | Canola | nucleus | 29.32 | 34.14 |
| CDY02051 | Canola | nucleus | 17.48 | 33.57 |
| CDY65564 | Canola | nucleus, plastid | 29.7 | 33.55 |
| CDX91470 | Canola | nucleus, plastid | 29.89 | 33.4 |
| CDX96873 | Canola | nucleus | 28.95 | 33.05 |
| CDY69941 | Canola | nucleus, plastid | 29.51 | 32.91 |
| CDY62213 | Canola | nucleus | 28.57 | 32.76 |
| CDY18383 | Canola | nucleus, plastid | 29.51 | 32.64 |
| CDY33788 | Canola | nucleus | 26.88 | 32.35 |
| CDY07729 | Canola | nucleus | 28.57 | 32.14 |
| CDY72350 | Canola | nucleus | 8.65 | 31.72 |
| CDY45169 | Canola | nucleus | 28.57 | 31.28 |
| CDY16122 | Canola | nucleus | 26.32 | 31.25 |
| CDY14459 | Canola | nucleus, plastid | 28.76 | 31.22 |
| CDY37191 | Canola | nucleus | 28.38 | 31.07 |
| CDX94335 | Canola | nucleus | 29.89 | 30.93 |
| CDX74281 | Canola | nucleus | 26.13 | 30.82 |
| CDY03003 | Canola | nucleus | 28.2 | 30.67 |
| CDX89336 | Canola | nucleus | 30.45 | 30.34 |
| CDY69527 | Canola | nucleus | 30.83 | 30.2 |
| CDY11947 | Canola | nucleus | 32.52 | 30.14 |
| CDY42736 | Canola | nucleus | 29.7 | 29.87 |
| CDX93073 | Canola | nucleus | 20.3 | 29.35 |
| CDY48650 | Canola | nucleus, plastid | 24.44 | 29.35 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 33.46 | 29.09 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 33.46 | 28.99 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 33.46 | 28.94 |
| CDY36788 | Canola | nucleus | 33.83 | 28.85 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 33.27 | 27.74 |
| CDY62292 | Canola | nucleus | 10.71 | 27.4 |
| CDY49388 | Canola | nucleus | 34.02 | 26.97 |
| CDX74976 | Canola | nucleus | 19.55 | 26.13 |
| CDY50038 | Canola | nucleus | 21.24 | 25.92 |
| CDX91348 | Canola | nucleus | 19.17 | 25.37 |
| CDY62293 | Canola | nucleus | 9.59 | 25.12 |
| CDY32799 | Canola | nucleus | 26.13 | 23.13 |
| CDY36463 | Canola | nucleus | 17.29 | 23.06 |
| CDY47543 | Canola | nucleus | 11.47 | 21.55 |
| CDY23265 | Canola | nucleus | 17.48 | 20.35 |
| CDX79729 | Canola | nucleus | 11.84 | 19.57 |
| CDY46769 | Canola | nucleus | 11.84 | 19.5 |
| CDY46768 | Canola | nucleus | 11.84 | 19.5 |
| CDY47546 | Canola | nucleus | 14.29 | 19.34 |
| CDY10548 | Canola | nucleus | 15.41 | 19.03 |
| CDY13396 | Canola | nucleus | 18.23 | 18.27 |
| CDY59057 | Canola | nucleus | 15.23 | 18.12 |
| CDY26094 | Canola | nucleus | 13.91 | 17.79 |
| CDY08253 | Canola | nucleus | 13.91 | 17.79 |
| CDY67588 | Canola | nucleus | 14.47 | 14.92 |
| CDY52777 | Canola | nucleus, plastid | 4.7 | 14.62 |
| CDY54360 | Canola | nucleus | 15.04 | 14.39 |
| CDX72277 | Canola | nucleus | 18.23 | 13.23 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | unigene:Bna.7158 | GO:C4N0V8 | UniProt:C4N0V8 | EnsemblPlants:CDX94303 |
| ProteinID:CDX94303 | ProteinID:CDX94303.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00157398001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0001A64837 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC01g18810DBnaC01g18810D protein [Source:UniProtKB/TrEMBL;Acc:C4N0V8]
Coordinates
chrLK031881:+:97940..101091
Molecular Weight (calculated)
58664.5 Da
IEP (calculated)
7.184
GRAVY (calculated)
-0.960
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPQVDNDRK EFPVDPTASR GGGNGGGGAR YKLMSPAKLP ISRSTDITIP PGLSPTSFLE SPVFISNIKP EPSPTTGSLF KPRPVHVSSS SYTGRPFHQD
101: STFPEQNSSE FEFRPPASTM VYAELDKHRS EPAVQFQGQG YGSSHSPSSI SEAAANSSEL RRPTQSSDIP AGSEVDESVQ ASQNDPRGSA PAVLADDGYN
201: WRKYGQKHVK GSEFPRSYYK CTHPNCEVKK LFERSYDGQI TDIIYKGTHD HPKPQPGRRN SCSLGMSAQE ERVEKGVYNL AQAIEQAGNP EVPLTPEDGG
301: EVAVSNKSKD DQDEDDPYTK RRRLDGTMEI TPLVKPIREP RVVVQTLSEV DILDDGYRWR KYGQKVVRGN PNPRSYYKCT APGCPVRKHV ERASHDPKAV
401: ITTYEGKHNH DVPTSKSSSN HHDNQPRFRP GETDTVSLNL GVGISSDGLD HTSNERQHQN QQQLINQTHP NGVGFRFVHA APIASYYASL NGGLNQYAPR
501: ETQNETQNGD ISSLNHSSYP YPQNIGRIQS GP
101: STFPEQNSSE FEFRPPASTM VYAELDKHRS EPAVQFQGQG YGSSHSPSSI SEAAANSSEL RRPTQSSDIP AGSEVDESVQ ASQNDPRGSA PAVLADDGYN
201: WRKYGQKHVK GSEFPRSYYK CTHPNCEVKK LFERSYDGQI TDIIYKGTHD HPKPQPGRRN SCSLGMSAQE ERVEKGVYNL AQAIEQAGNP EVPLTPEDGG
301: EVAVSNKSKD DQDEDDPYTK RRRLDGTMEI TPLVKPIREP RVVVQTLSEV DILDDGYRWR KYGQKVVRGN PNPRSYYKCT APGCPVRKHV ERASHDPKAV
401: ITTYEGKHNH DVPTSKSSSN HHDNQPRFRP GETDTVSLNL GVGISSDGLD HTSNERQHQN QQQLINQTHP NGVGFRFVHA APIASYYASL NGGLNQYAPR
501: ETQNETQNGD ISSLNHSSYP YPQNIGRIQS GP
001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.