Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37191 | Canola | nucleus | 85.96 | 30.25 |
| CDY03003 | Canola | nucleus | 77.19 | 26.99 |
| CDY53941 | Canola | nucleus | 67.84 | 26.36 |
| CDY45169 | Canola | nucleus | 74.85 | 26.34 |
| CDY62213 | Canola | nucleus | 55.56 | 20.47 |
| CDX96873 | Canola | nucleus | 54.97 | 20.17 |
| CDY36419 | Canola | nucleus | 47.37 | 17.8 |
| CDX98138 | Canola | nucleus | 47.37 | 17.72 |
| CDY33788 | Canola | nucleus | 45.03 | 17.42 |
| CDY16122 | Canola | nucleus | 40.35 | 15.4 |
| CDY02051 | Canola | nucleus | 14.62 | 9.03 |
| CDY10720 | Canola | nucleus | 16.37 | 7.51 |
| CDY14055 | Canola | nucleus | 12.87 | 6.9 |
| CDY05016 | Canola | nucleus | 12.87 | 6.9 |
| CDY29685 | Canola | nucleus | 14.04 | 6.86 |
| CDX97834 | Canola | nucleus | 14.04 | 6.65 |
| CDY24017 | Canola | nucleus | 14.62 | 6.61 |
| CDX84848 | Canola | nucleus | 14.04 | 6.35 |
| CDY10548 | Canola | nucleus | 15.2 | 6.03 |
| CDX74281 | Canola | nucleus | 15.2 | 5.76 |
| CDY59057 | Canola | nucleus | 14.62 | 5.59 |
| CDY47546 | Canola | nucleus | 12.28 | 5.34 |
| CDY70490 | Canola | nucleus | 15.79 | 5.21 |
| CDY14304 | Canola | nucleus | 16.37 | 5.12 |
| CDX94335 | Canola | nucleus | 15.2 | 5.06 |
| CDX97359 | Canola | nucleus | 15.79 | 5.03 |
| CDX89317 | Canola | nucleus | 15.2 | 4.87 |
| CDX92808 | Canola | nucleus | 14.62 | 4.77 |
| CDX94303 | Canola | nucleus | 14.62 | 4.7 |
| CDY32799 | Canola | nucleus | 16.37 | 4.66 |
| CDY69527 | Canola | nucleus | 14.62 | 4.6 |
| CDY26094 | Canola | nucleus | 11.11 | 4.57 |
| CDY08253 | Canola | nucleus | 11.11 | 4.57 |
| CDX89336 | Canola | nucleus | 13.45 | 4.31 |
| CDY48650 | Canola | nucleus, plastid | 11.11 | 4.29 |
| CDX91470 | Canola | nucleus, plastid | 11.7 | 4.2 |
| CDY49388 | Canola | nucleus | 16.37 | 4.17 |
| KRH34225 | Soybean | nucleus | 4.68 | 4.17 |
| CDY36788 | Canola | nucleus | 15.2 | 4.17 |
| CDY42736 | Canola | nucleus | 12.87 | 4.16 |
| CDX79729 | Canola | nucleus | 7.6 | 4.04 |
| CDY65564 | Canola | nucleus, plastid | 11.11 | 4.03 |
| CDY46768 | Canola | nucleus | 7.6 | 4.02 |
| CDY46769 | Canola | nucleus | 7.6 | 4.02 |
| CDY46692 | Canola | nucleus | 12.28 | 4.0 |
| CDY11947 | Canola | nucleus | 12.87 | 3.83 |
| CDY07729 | Canola | nucleus | 10.53 | 3.81 |
| CDY14459 | Canola | nucleus, plastid | 10.53 | 3.67 |
| CDX74976 | Canola | nucleus | 8.19 | 3.52 |
| CDY69941 | Canola | nucleus, plastid | 9.36 | 3.35 |
| CDY18383 | Canola | nucleus, plastid | 9.36 | 3.33 |
| CDY62293 | Canola | nucleus | 3.51 | 2.96 |
| CDY67588 | Canola | nucleus | 8.77 | 2.91 |
| CDY54360 | Canola | nucleus | 8.77 | 2.7 |
| CDX91348 | Canola | nucleus | 5.85 | 2.49 |
| KRH03057 | Soybean | nucleus | 5.26 | 2.33 |
| CDY23265 | Canola | nucleus | 4.09 | 1.53 |
| CDY13396 | Canola | nucleus | 4.68 | 1.51 |
| CDY50038 | Canola | nucleus | 2.92 | 1.15 |
| CDY47543 | Canola | nucleus | 1.75 | 1.06 |
| CDY36463 | Canola | nucleus | 2.34 | 1.0 |
| CDY62292 | Canola | nucleus | 1.17 | 0.96 |
| CDX72277 | Canola | nucleus | 2.92 | 0.68 |
| CDX93073 | Canola | nucleus | 0.0 | 0.0 |
| CDY72350 | Canola | nucleus | 0.0 | 0.0 |
| KRH03056 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY52777 | EnsemblPlantsGene:GSBRNA2T00007830001 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF84 | ProteinID:CDY52777 | ProteinID:CDY52777.1 |
| SEG:seg | UniParc:UPI0004EDB621 | UniProt:A0A078IS20 | MapMan:35.1 | : | : |
Description
BnaC02g47970DBnaC02g47970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS20]
Coordinates
chrLK033129:-:65350..66189
Molecular Weight (calculated)
17755.9 Da
IEP (calculated)
4.909
GRAVY (calculated)
-0.137
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLVSNMFSD HPDEFKSFSQ LVAGAMASPA AAAVVASAHQ TPVSSVGGGG DSLLDPRSKQ NRPTGLMITQ PPGMFTVPPG LSPATLLDSP SFFGLFSPIQ
101: GSFGMTHQQA LAQVTAQGNT VQIQSGSSTQ QQTLVTEIPS LPAPVQDSLQ AQRVDSAVSV YENRSQPQNA S
101: GSFGMTHQQA LAQVTAQGNT VQIQSGSSTQ QQTLVTEIPS LPAPVQDSLQ AQRVDSAVSV YENRSQPQNA S
001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
Arabidopsis Description
WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.