Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74976 | Canola | nucleus | 91.04 | 91.96 |
| AT2G37260.1 | Thale cress | nucleus | 79.85 | 74.83 |
| CDY46768 | Canola | nucleus | 58.46 | 72.76 |
| CDY46769 | Canola | nucleus | 58.46 | 72.76 |
| CDX79729 | Canola | nucleus | 58.21 | 72.67 |
| VIT_08s0040g03070.t01 | Wine grape | nucleus | 47.76 | 40.25 |
| KRH67621 | Soybean | nucleus | 44.28 | 39.73 |
| KRG95903 | Soybean | nucleus | 44.53 | 38.0 |
| GSMUA_Achr1P17160_001 | Banana | nucleus | 37.06 | 36.25 |
| GSMUA_Achr4P16840_001 | Banana | nucleus | 37.06 | 35.39 |
| Solyc10g084380.1.1 | Tomato | nucleus | 35.57 | 33.89 |
| PGSC0003DMT400028530 | Potato | nucleus | 38.56 | 33.19 |
| CDY05016 | Canola | nucleus | 25.12 | 31.66 |
| CDY14055 | Canola | nucleus | 24.63 | 31.03 |
| CDY29685 | Canola | nucleus | 25.37 | 29.14 |
| CDX97834 | Canola | nucleus | 25.37 | 28.25 |
| CDY10720 | Canola | nucleus | 24.88 | 26.81 |
| CDY53941 | Canola | nucleus | 28.61 | 26.14 |
| CDY24017 | Canola | nucleus | 24.38 | 25.93 |
| CDX84848 | Canola | nucleus | 24.38 | 25.93 |
| CDX98138 | Canola | nucleus | 28.86 | 25.38 |
| CDY36419 | Canola | nucleus | 28.61 | 25.27 |
| CDY33788 | Canola | nucleus | 27.61 | 25.11 |
| CDX96873 | Canola | nucleus | 29.1 | 25.11 |
| CDY62213 | Canola | nucleus | 28.86 | 25.0 |
| CDY65564 | Canola | nucleus, plastid | 28.61 | 24.42 |
| CDY16122 | Canola | nucleus | 27.11 | 24.33 |
| CDX91470 | Canola | nucleus, plastid | 28.61 | 24.16 |
| CDY69941 | Canola | nucleus, plastid | 28.61 | 24.11 |
| CDY37191 | Canola | nucleus | 28.86 | 23.87 |
| CDX74281 | Canola | nucleus | 26.62 | 23.73 |
| CDY18383 | Canola | nucleus, plastid | 28.36 | 23.7 |
| CDY07729 | Canola | nucleus | 27.61 | 23.47 |
| CDY03003 | Canola | nucleus | 28.36 | 23.31 |
| CDX93073 | Canola | nucleus | 21.14 | 23.1 |
| CDY14459 | Canola | nucleus, plastid | 28.11 | 23.06 |
| CDY45169 | Canola | nucleus | 27.86 | 23.05 |
| CDX94335 | Canola | nucleus | 27.86 | 21.79 |
| CDY02051 | Canola | nucleus | 14.93 | 21.66 |
| CDY70490 | Canola | nucleus | 27.61 | 21.43 |
| CDY69527 | Canola | nucleus | 28.61 | 21.18 |
| CDX89336 | Canola | nucleus | 27.86 | 20.97 |
| CDY42736 | Canola | nucleus | 27.36 | 20.79 |
| CDY72350 | Canola | nucleus | 7.46 | 20.69 |
| CDY48650 | Canola | nucleus, plastid | 22.64 | 20.54 |
| CDY50038 | Canola | nucleus | 22.14 | 20.41 |
| CDY11947 | Canola | nucleus | 27.61 | 19.34 |
| CDX89317 | Canola | nucleus | 25.62 | 19.29 |
| CDY46692 | Canola | nucleus | 25.12 | 19.24 |
| CDX97359 | Canola | nucleus | 25.62 | 19.18 |
| CDX94303 | Canola | nucleus | 25.37 | 19.17 |
| CDX92808 | Canola | nucleus | 24.88 | 19.08 |
| CDY14304 | Canola | nucleus | 25.87 | 19.01 |
| CDY36463 | Canola | nucleus | 18.66 | 18.8 |
| CDY49388 | Canola | nucleus | 31.09 | 18.63 |
| CDY36788 | Canola | nucleus | 28.61 | 18.43 |
| CDY62293 | Canola | nucleus | 8.71 | 17.24 |
| CDY23265 | Canola | nucleus | 18.91 | 16.63 |
| CDY62292 | Canola | nucleus | 8.46 | 16.35 |
| CDY47543 | Canola | nucleus | 10.7 | 15.19 |
| CDY32799 | Canola | nucleus | 21.64 | 14.48 |
| CDY13396 | Canola | nucleus | 18.66 | 14.12 |
| CDY26094 | Canola | nucleus | 14.18 | 13.7 |
| CDY08253 | Canola | nucleus | 14.18 | 13.7 |
| CDY10548 | Canola | nucleus | 14.43 | 13.46 |
| CDY59057 | Canola | nucleus | 14.93 | 13.42 |
| CDY47546 | Canola | nucleus | 12.94 | 13.23 |
| CDY67588 | Canola | nucleus | 13.43 | 10.47 |
| CDY54360 | Canola | nucleus | 14.43 | 10.43 |
| CDX72277 | Canola | nucleus | 18.91 | 10.37 |
| CDY52777 | Canola | nucleus, plastid | 2.49 | 5.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DVU4 | UniProt:A0A078DVU4 | ProteinID:AJD07414.1 | EnsemblPlants:CDX91348 |
| ProteinID:CDX91348 | ProteinID:CDX91348.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00152636001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF50 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE6BCD | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC04g08020DBnaC04g08020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078DVU4]
Coordinates
chrLK031867:+:156635..158096
Molecular Weight (calculated)
44308.5 Da
IEP (calculated)
9.815
GRAVY (calculated)
-0.910
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVKERERKL IVKPVASRPS CSSVRTITEL MTDSVTVSPQ SNCHETVDAS IRPKTERFKQ PASASVSSPR VEGSGNVKSC NDSESISYVI YKPKAKLVSQ
101: ATVSALANMT WIKREAVAYG KRVSQGTHRA GPNLIPRVPT FKESETSTGD RSYVDGYNWR KYGQKQVKGS DSPRGYYKCT HPKCPVKKRV ERSMGGHVSE
201: IVYQGEHNHS KPSCPLPRRA SSSSSSGFQT PSEGSMGEEP NPLWSNQEKM NEGCVITPFE FAVPRTANSS GGTSDSGCRS SQCDERELDD PSRSKTSMKN
301: EKQSSEAGVS QSSGESDSLE DGFKWRKYGQ KAVGGNAYPR SYYRCTSVNC RARKRVERAS GDSRAFITTY EGKHNHHHLL LRPTTSSTPL PFSSPQHSNQ
401: AI
101: ATVSALANMT WIKREAVAYG KRVSQGTHRA GPNLIPRVPT FKESETSTGD RSYVDGYNWR KYGQKQVKGS DSPRGYYKCT HPKCPVKKRV ERSMGGHVSE
201: IVYQGEHNHS KPSCPLPRRA SSSSSSGFQT PSEGSMGEEP NPLWSNQEKM NEGCVITPFE FAVPRTANSS GGTSDSGCRS SQCDERELDD PSRSKTSMKN
301: EKQSSEAGVS QSSGESDSLE DGFKWRKYGQ KAVGGNAYPR SYYRCTSVNC RARKRVERAS GDSRAFITTY EGKHNHHHLL LRPTTSSTPL PFSSPQHSNQ
401: AI
001: MEVNDGERVV IAKPVASRPS SSSGFRTFTE LLTDSVTVSP QTTCHEIVDA AIRPKTLRFN QPVAASVSCP RAEVKGIGNG MSCDDDSDSR NYVVYKPKAK
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI
Arabidopsis Description
WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.