Factsheet for Solyc10g084380.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028530	Potato	nucleus	91.71	82.87
VIT_08s0040g03070.t01	Wine grape	nucleus	50.95	45.07
KRH67621	Soybean	nucleus	45.02	42.41
KRG95903	Soybean	nucleus	45.73	40.98
GSMUA_Achr1P17160_001	Banana	nucleus	36.97	37.96
GSMUA_Achr4P16840_001	Banana	nucleus	37.2	37.29
Bra023112.1-P	Field mustard	nucleus	36.73	36.9
AT2G37260.1	Thale cress	nucleus	36.73	36.13
Bra005210.1-P	Field mustard	nucleus	34.83	35.94
CDX91348	Canola	nucleus	33.89	35.57
CDX74976	Canola	nucleus	33.41	35.43
CDX79729	Canola	nucleus	23.22	30.43
CDY46768	Canola	nucleus	23.22	30.34
CDY46769	Canola	nucleus	23.22	30.34
Solyc04g056360.2.1	Tomato	nucleus	24.17	25.44
Solyc05g012770.2.1	Tomato	nucleus	30.33	25.2
Solyc03g104810.2.1	Tomato	nucleus	27.96	24.28
Solyc05g055750.2.1	Tomato	nucleus	26.3	24.18
Solyc12g006170.1.1	Tomato	nucleus	23.7	24.1
Solyc02g088340.2.1	Tomato	nucleus	25.83	23.7
Solyc06g066370.2.1	Tomato	nucleus	29.86	23.55
Solyc07g047960.2.1	Tomato	nucleus	22.99	23.49
Solyc09g014990.2.1	Tomato	nucleus	27.49	21.93
Solyc12g014610.1.1	Tomato	nucleus	27.96	19.31
Solyc07g065260.2.1	Tomato	nucleus	27.01	19.13
Solyc07g005650.2.1	Tomato	nucleus	20.85	17.15
Solyc07g066220.2.1	Tomato	nucleus	29.15	16.64
Solyc10g005680.1.1	Tomato	nucleus	24.17	14.51

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4D3M4	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF50	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc10g084380.1
EnsemblPlants:Solyc10g084380.1.1	UniParc:UPI000276A26B	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:63951928..63954533

Molecular Weight (calculated)

46989.0 Da

IEP (calculated)

9.956

GRAVY (calculated)

-0.964

Length

422 amino acids

Sequence
(BLAST)

001: MAITAIRPKT VRLKPVTNHA LVGESSSQVG VSEAPAGCRS DYILQSVEKP KVLYKPIAKL APRKTIPLLE NKGISISDQR REKADAKADV QSAKEAKQHH
101: DLTTESKQSL LAKSGEDKRI VHSTIVSEST EEVPQSLINT SNVDRPSYDG YNWRKYGQKQ VKGSEYPRSY YKCTHLKCPV KKKVERSYDG QIAEIVYRGE
201: HNHPKPQPPK RNLSDVQVRA AVCNDTSKET NNPAWSNQHP QTSEAYVCRI ENPNDVGLTI NSAHSSKAPW FYDPIAAAGM HTDAGNSEDS AEGSKKLKAT
301: CDDTKTKRRK TKALCNGAGT SGESTFPYIP KQSTTDSEIT EDGFRWRKYG QKVVKGSSYP RSYYRCTSPK CSVRKFVERT MDDPKAFITT YEGKHNHGVP
401: NRRPNSEASK TSSKSSAMKE KS

Best Arabidopsis Sequence Match ( AT2G37260.1 )
(BLAST)

001: MEVNDGERVV IAKPVASRPS SSSGFRTFTE LLTDSVTVSP QTTCHEIVDA AIRPKTLRFN QPVAASVSCP RAEVKGIGNG MSCDDDSDSR NYVVYKPKAK
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI

Arabidopsis Description

WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.