Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060042 | Potato | nucleus | 84.75 | 85.12 |
| Solyc04g056360.2.1 | Tomato | nucleus | 31.15 | 35.66 |
| Solyc06g066370.2.1 | Tomato | nucleus | 32.68 | 28.04 |
| Solyc09g014990.2.1 | Tomato | nucleus | 31.81 | 27.6 |
| Solyc05g012770.2.1 | Tomato | nucleus | 30.5 | 27.56 |
| Solyc10g084380.1.1 | Tomato | nucleus | 24.18 | 26.3 |
| Solyc02g088340.2.1 | Tomato | nucleus | 25.93 | 25.87 |
| Solyc03g104810.2.1 | Tomato | nucleus | 26.8 | 25.31 |
| Solyc07g047960.2.1 | Tomato | nucleus | 22.0 | 24.46 |
| Solyc07g065260.2.1 | Tomato | nucleus | 31.15 | 23.99 |
| Solyc12g006170.1.1 | Tomato | nucleus | 21.57 | 23.86 |
| Solyc12g014610.1.1 | Tomato | nucleus | 30.72 | 23.08 |
| Solyc07g066220.2.1 | Tomato | nucleus | 33.12 | 20.57 |
| Solyc10g005680.1.1 | Tomato | nucleus | 27.45 | 17.92 |
| Solyc07g005650.2.1 | Tomato | nucleus | 19.17 | 17.15 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4C2Q0 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc05g055750.2 |
| EnsemblPlants:Solyc05g055750.2.1 | UniParc:UPI0002767255 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
No Description!
Coordinates
chr5:-:65264002..65267417
Molecular Weight (calculated)
51648.1 Da
IEP (calculated)
8.836
GRAVY (calculated)
-0.826
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLTIPPGI SPAALLDSPF MQPTSLTPTK NVGEILNCIE SRKNEEEFSK KQNQQYEQRG IYNSANNSSD DGYTWRKYGQ KQVKGSNFPR SYYKCTEPKC
101: LVRKKVESAP NGHVIEIVYN GAHTHPKTRR KTSDVVAQQN GSSSSSDLLW RNDQYSRDVA AALEPVISDA SDSMLSNNIN NVFESNDISS KLTTFDAENE
201: HLATHFLGDG INQYEFETKR RKKDGYLAEP SSLSRTVREP KVVLQVASEI DILEDGYRWR KYGQKVVKGN PNPRSYYKCT SGGCTVRKHV ERAADDFKSV
301: ITTYEGKHNH EVPSTNKTNG VSGNVRSASM LNNGQQPCTT TSRKSLKDSN TRVQFQDLPI PFERKHFMGS EYLRPSYLGD LSYGATSLQL PDFPLPLPLP
401: SRMSFPARQN ESHFHLNTNF LLPNGASNSF LADGSTQNIH GDNNNSRLVK AKDEIQYWT
101: LVRKKVESAP NGHVIEIVYN GAHTHPKTRR KTSDVVAQQN GSSSSSDLLW RNDQYSRDVA AALEPVISDA SDSMLSNNIN NVFESNDISS KLTTFDAENE
201: HLATHFLGDG INQYEFETKR RKKDGYLAEP SSLSRTVREP KVVLQVASEI DILEDGYRWR KYGQKVVKGN PNPRSYYKCT SGGCTVRKHV ERAADDFKSV
301: ITTYEGKHNH EVPSTNKTNG VSGNVRSASM LNNGQQPCTT TSRKSLKDSN TRVQFQDLPI PFERKHFMGS EYLRPSYLGD LSYGATSLQL PDFPLPLPLP
401: SRMSFPARQN ESHFHLNTNF LLPNGASNSF LADGSTQNIH GDNNNSRLVK AKDEIQYWT
001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
Arabidopsis Description
WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.