Factsheet for Os08t0499300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0285800-01
Os06t0154500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	Os06t0154500-01	AT2G43790.1	24830428
AT4G26440.1	Os03t0285800-01	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80981	Sorghum	nucleus	61.28	60.29
TraesCS7D01G239800.2	Wheat	nucleus	53.56	57.48
TraesCS7B01G136400.2	Wheat	nucleus, plastid	52.97	56.4
TraesCS7A01G240800.1	Wheat	nucleus	53.86	55.76
HORVU7Hr1G049130.1	Barley	nucleus, plastid	20.18	55.51
Zm00001d052847_P001	Maize	nucleus	58.9	54.46
Os09t0481700-01	Rice	nucleus	50.3	53.55
GSMUA_Achr5P23900_001	Banana	nucleus	38.43	45.84
Bra028939.1-P	Field mustard	nucleus	29.53	44.32
GSMUA_Achr6P03500_001	Banana	nucleus	33.68	44.08
GSMUA_Achr4P01600_001	Banana	nucleus	42.73	43.24
GSMUA_Achr11P...	Banana	nucleus	40.65	42.35
CDY11947	Canola	nucleus	35.61	41.81
GSMUA_Achr5P04150_001	Banana	nucleus	38.87	41.39
CDY36788	Canola	nucleus	38.28	41.35
Bra002828.1-P	Field mustard	nucleus	39.91	39.97
CDY49388	Canola	nucleus	39.61	39.79
AT5G56270.1	Thale cress	nucleus	39.76	39.01
Bra026438.1-P	Field mustard	nucleus	30.12	38.02
CDX89336	Canola	nucleus	30.12	38.02
CDX94335	Canola	nucleus	28.93	37.94
CDY32799	Canola	nucleus	33.53	37.6
Os05t0343400-01	Rice	nucleus	26.85	37.17
CDY69527	Canola	nucleus	28.78	35.73
CDY42736	Canola	nucleus	27.89	35.54
Bra019105.1-P	Field mustard	nucleus	27.89	35.54
AT4G26440.1	Thale cress	nucleus	29.67	35.21
Os12t0507300-00	Rice	nucleus	19.44	32.83
VIT_19s0015g01870.t01	Wine grape	nucleus	35.61	32.17
Os01t0826400-01	Rice	extracellular	26.41	32.07
Os07t0596900-00	Rice	nucleus	20.33	31.71
Os07t0583700-01	Rice	nucleus	28.78	31.39
Os05t0474800-01	Rice	nucleus	26.11	30.77
KRH62550	Soybean	nucleus	34.72	30.75
Os03t0758950-01	Rice	nucleus, plastid	19.29	29.61
KRH56379	Soybean	nucleus	33.98	29.51
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	14.99	27.08
Os04t0471700-00	Rice	nucleus	39.17	26.45
PGSC0003DMT400029328	Potato	nucleus	25.82	24.96
Solyc10g005680.1.1	Tomato	nucleus	25.07	24.04
Os08t0276200-01	Rice	cytosol, nucleus, plastid	8.9	16.39
Os03t0758900-01	Rice	plastid	1.04	1.73

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4345940	EMBL:AK065518	EMBL:AY870610	ProteinID:BAD08802.1
ProteinID:BAF24062.1	ProteinID:BAT06092.1	ProteinID:BAT06093.1	EMBL:DQ298180	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EMBL:HM153428	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlantsGene:Os08g0499300	EnsemblPlants:Os08t0499300-01	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86
UniProt:Q6ZKN0	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000023AC09	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_015650158.1	RefSeq:XP_015650159.1	RefSeq:XP_015650160.1	RefSeq:XP_015650162.1	RefSeq:XP_015650163.1	RefSeq:XP_015650164.1
RefSeq:XP_015650165.1	SEG:seg	:	:	:	:

Description

WRKY GENE 30WRKY transcription factor 30. (Os08t0499300-01);Similar to WRKY transcription factor 42 (Fragment). (Os08t0499300-02)

Coordinates

chr8:-:24645932..24649832

Molecular Weight (calculated)

73265.2 Da

IEP (calculated)

7.760

GRAVY (calculated)

-0.716

Length

674 amino acids

Sequence
(BLAST)

001: MDGTNNHGAL MDDWMLPSPS PRTLMSSFLN EEFSSGPFSD IFCDNGSNKH QDGLGKSKAF IDSSREETAQ LAKKFESNLF GANQKSSSNG CLSERMAART
101: GFGVLKIDTS RVGYSTPIRS PVTIPPGVSP RELLESPVFL PNAIAQPSPT TGKLPFLMHS NVKPSIPKKT EDETRHDRVF FFQPILGSKP PTCPVAEKGF
201: SVNHQNQPSV TDNHQELSLQ SSSTAAKDFT SATIVKPKTS DSMLDNDDHP SPANDQEENA TNKNEEYSSD LIITPAEDGY NWRKYGQKQV KNSEHPRSYY
301: KCTFTNCAVK KVERSQDGQI TEIVYKGSHN HPLPPSNRRP NVPFSHFNDL RDDHSEKFGS KSGQATATSW ENAANGHLQD VGSEVLTKLS ASLTTTEHAE
401: KSVMDKQEAV DISSTLSNEE DDRVTHRAPL SLGFDANDDY VEHKRRKMDV YAATSTSTNA IDIGAVASRA IREPRVVVQT TSEVDILDDG YRWRKYGQKV
501: VKGNPNPRSY YKCTHPGCSV RKHVERSSHD LKSVITTYEG KHNHEVPAAR NSGHPSSGSA AAPQATNGLL HRRPEPAQGG GGGSLAQFGY GSAGHRPAEQ
601: FGAAAAGFSF GMLPRSIATP APSPAIAVPA MQGYPGLVLP RGEMKVNLLP QSGNAGAAAS QQLMGRLPKQ HPQM

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.