Factsheet for Os08t0276200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G185400.2	Wheat	nucleus	59.84	41.95
TraesCS7D01G287200.1	Wheat	nucleus	59.56	41.76
TraesCS7A01G294800.2	Wheat	nucleus	59.02	41.38
EES14907	Sorghum	nucleus	60.11	38.66
Zm00001d050023_P001	Maize	extracellular	58.2	37.63
HORVU7Hr1G066670.4	Barley	nucleus	58.47	36.9
GSMUA_AchrUn_...	Banana	nucleus	34.15	27.29
GSMUA_Achr10P...	Banana	nucleus	30.05	23.26
GSMUA_Achr9P19580_001	Banana	nucleus	34.43	22.58
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	16.39	16.09
Os12t0507300-00	Rice	nucleus	16.94	15.54
Os07t0596900-00	Rice	nucleus	16.12	13.66
Os05t0343400-01	Rice	nucleus	16.67	12.53
Os01t0826400-01	Rice	extracellular	18.58	12.25
Os03t0758950-01	Rice	nucleus, plastid	13.39	11.16
Os05t0474800-01	Rice	nucleus	15.3	9.79
Os08t0499300-01	Rice	nucleus	16.39	8.9
Os07t0583700-01	Rice	nucleus	15.03	8.9
Os04t0471700-00	Rice	nucleus	19.4	7.11
Os09t0481700-01	Rice	nucleus	7.65	4.42
Os03t0758900-01	Rice	plastid	3.28	2.96

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:BAF23347.1	ProteinID:BAT04677.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os08g0276200	EnsemblPlants:Os08t0276200-01
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF29	UniProt:Q0J6R8	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0000DD9485	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

WRKY GENE 89Similar to WRKY transcription factor 44 (WRKY DNA-binding protein 44) (TRANSPARENT TESTA GLABRA 2). (Os08t0276200-01)

Coordinates

chr8:-:10637548..10639603

Molecular Weight (calculated)

39400.1 Da

IEP (calculated)

6.092

GRAVY (calculated)

-0.876

Length

366 amino acids

Sequence
(BLAST)

001: MPDGYPAAPP GMERPAPEAA AAAAEPPGAK AEEEEEGPKD VGVKGTGKEK ETEKVEAEKE MEGKGKGKES MEVEEGKEKE GKGKAKEKEK ETKVKVKEEG
101: GEEKEKGKVE VVEAKRRPAG VGAETPILAV PMVAVPCFLA SPAFAGHFSM SHQAALASVT AQAQIQLQSP TTPYSEGLPS PFPITPKAVM PLQRSPSGTE
201: GSVRRSVLEK SASFQSRPHN HVSVNMVGDG FNWRKYGQKQ VKSSENSRSY YRCTNSNCLA KKKVEHCPDG RVVEIIYRGT HNHEPPQKTR FVKERVAHIT
301: ASSGDDETLG LVNNEIIESP SPGCKLEPGA VSEASEQQLF CSSDCEGDAG NKSEDDHPST EPQPKR

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.