Factsheet for GSMUA_AchrUn_randomP13180_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	56.11	54.33
GSMUA_Achr9P19580_001	Banana	nucleus	59.39	48.75
TraesCS7B01G185400.2	Wheat	nucleus	41.7	36.59
TraesCS7A01G294800.2	Wheat	nucleus	41.7	36.59
TraesCS7D01G287200.1	Wheat	nucleus	41.48	36.4
EES14907	Sorghum	nucleus	44.1	35.5
Zm00001d050023_P001	Maize	extracellular	43.23	34.98
Os08t0276200-01	Rice	cytosol, nucleus, plastid	27.29	34.15
HORVU7Hr1G066670.4	Barley	nucleus	42.14	33.28
GSMUA_Achr3P09940_001	Banana	nucleus	24.89	31.15
GSMUA_Achr4P14270_001	Banana	nucleus	30.13	30.53
GSMUA_Achr10P...	Banana	nucleus	30.79	30.45
GSMUA_Achr7P26450_001	Banana	nucleus	31.22	29.92
VIT_04s0008g06600.t01	Wine grape	nucleus	31.44	29.33
GSMUA_Achr4P07230_001	Banana	nucleus	29.91	29.15
GSMUA_Achr6P16760_001	Banana	nucleus	30.35	28.84
CDY36463	Canola	nucleus	24.02	27.57
GSMUA_Achr7P25840_001	Banana	nucleus	14.85	27.53
GSMUA_Achr7P00610_001	Banana	nucleus	27.73	26.35
PGSC0003DMT400029069	Potato	mitochondrion	6.99	26.23
GSMUA_Achr6P32720_001	Banana	nucleus	25.98	26.1
Bra010266.1-P	Field mustard	nucleus	25.33	25.38
CDY23265	Canola	nucleus	25.33	25.38
GSMUA_Achr11P...	Banana	nucleus	25.76	25.32
KRH26105	Soybean	nucleus	25.55	25.05
VIT_11s0037g00150.t01	Wine grape	nucleus	26.86	24.65
GSMUA_Achr1P17160_001	Banana	nucleus	22.05	24.57
KRH54934	Soybean	nucleus	24.67	24.04
GSMUA_Achr4P13970_001	Banana	nucleus	26.64	23.78
Solyc07g005650.2.1	Tomato	nucleus	25.55	22.81
GSMUA_Achr4P16840_001	Banana	nucleus	20.74	22.57
AT4G30935.1	Thale cress	nucleus	22.93	22.53
CDY13396	Canola	nucleus	25.11	21.66
GSMUA_Achr8P01790_001	Banana	nucleus	26.86	21.58
GSMUA_Achr5P23900_001	Banana	nucleus	25.98	21.06
GSMUA_Achr3P29850_001	Banana	nucleus	26.2	20.83
KRH72303	Soybean	nucleus	23.8	20.45
GSMUA_Achr6P03500_001	Banana	nucleus	22.49	20.0
GSMUA_Achr5P04150_001	Banana	nucleus	27.51	19.91
Bra024035.1-P	Field mustard	nucleus	25.11	19.52
GSMUA_Achr11P...	Banana	nucleus	26.86	19.01
GSMUA_Achr4P01600_001	Banana	nucleus	27.29	18.77
CDX72277	Canola	nucleus	25.98	16.23

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_AchrUn_randomG13180_001	EnsemblPlants:GSMUA_AchrUn_randomP13180_001	EnsemblPlants:GSMUA_AchrUn_randomT13180_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0U8S7	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF29	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000296CDBF	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Probable WRKY transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13180_001]

Coordinates

chrchrUn_random:-:63322586..63332083

Molecular Weight (calculated)

49292.3 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.838

Length

458 amino acids

Sequence
(BLAST)

001: MTEEGDGSAT PQEDKPRGGD DDGGTPPSPS SERPPPADLG SDATAVGKGG GSGAVPAAKA DGRSFSQLLA GAMASPVGSP RPPPILTVPV VAVPCLLAPA
101: ALLESPGFTG QFAMTHQAVL AAVTAQAQMQ MQAAYPPPSE TTTNSFPHSM LPAVSPVPLQ QMSSVPEACS GDIYHWRKYG QKQVKNTENF RSYYRCADSN
201: CLAKKKVECY PDGKICDVIY RGKHNHDPPQ KYRYTRDRGA QSGGSSRENE SIERLKNELN ESGSSSCKAE QNSGNDTPEQ QLDHSSDCKG VAGVTTKKDF
301: GDEPDPKRRQ VVKRLLLSEN TKSFSMPVPK QVKEHVVQTE IDAKHLSDGY RWRKYGQKLV KGNPNPRSYY RCTHDGCPVR KHVERASHDA QSLLITYEGK
401: HNHDQPTPKF ASDQPASDTP EGAQSLPSSK GGSESTDPDG MRNPLLSENP AAVPVENC

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.