Factsheet for HORVU5Hr1G072020.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G057200.4
HORVU7Hr1G023760.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	HORVU7Hr1G023760.2	AT2G43790.1	24830428
AT4G26440.1	HORVU4Hr1G057200.4	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G258100.1	Wheat	nucleus	93.79	93.65
TraesCS5B01G257300.1	Wheat	nucleus	93.93	93.52
TraesCS5D01G266300.1	Wheat	nucleus	93.79	93.51
Os09t0481700-01	Rice	nucleus	64.05	68.4
KXG35872	Sorghum	nucleus	58.58	67.92
Zm00001d006001_P006	Maize	nucleus	54.14	63.76
Zm00001d020881_P002	Maize	nucleus	54.73	62.82
HORVU7Hr1G049130.1	Barley	nucleus, plastid	18.49	51.02
Bra028939.1-P	Field mustard	nucleus	32.1	48.33
GSMUA_Achr5P23900_001	Banana	nucleus	39.94	47.79
GSMUA_Achr6P03500_001	Banana	nucleus	35.35	46.41
GSMUA_Achr11P...	Banana	nucleus	44.08	46.06
CDY11947	Canola	nucleus	38.17	44.95
GSMUA_Achr5P04150_001	Banana	nucleus	41.86	44.71
GSMUA_Achr4P01600_001	Banana	nucleus	43.34	43.99
CDY36788	Canola	nucleus	40.24	43.59
Bra002828.1-P	Field mustard	nucleus	42.46	42.64
AT5G56270.1	Thale cress	nucleus	43.05	42.36
CDY49388	Canola	nucleus	42.01	42.32
CDY32799	Canola	nucleus	35.5	39.93
HORVU0Hr1G004890.10	Barley	nucleus	35.35	39.7
CDX94335	Canola	nucleus	29.44	38.72
Bra026438.1-P	Field mustard	nucleus	30.18	38.2
CDX89336	Canola	nucleus	30.03	38.02
CDY69527	Canola	nucleus	30.03	37.38
AT4G26440.1	Thale cress	nucleus	31.07	36.97
CDY42736	Canola	nucleus	28.85	36.86
Bra019105.1-P	Field mustard	nucleus	28.85	36.86
VIT_19s0015g01870.t01	Wine grape	nucleus	37.13	33.65
HORVU5Hr1G028340.1	Barley	nucleus	23.67	32.52
KRH62550	Soybean	nucleus	35.35	31.41
HORVU3Hr1G088200.4	Barley	nucleus, plastid	27.66	31.22
HORVU1Hr1G070250.2	Barley	nucleus, plastid	22.93	30.27
KRH56379	Soybean	nucleus	34.62	30.15
HORVU2Hr1G036320.1	Barley	nucleus	26.48	29.11
HORVU4Hr1G048400.1	Barley	mitochondrion	22.49	28.73
HORVU2Hr1G034420.2	Barley	nucleus	18.93	28.57
PGSC0003DMT400029328	Potato	nucleus	27.51	26.69
Solyc10g005680.1.1	Tomato	nucleus	26.04	25.04
HORVU7Hr1G066670.4	Barley	nucleus	17.9	20.86

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G072020	EnsemblPlants:HORVU5Hr1G072020.1	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0X915	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002965B23	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:534720376..534725296

Molecular Weight (calculated)

73313.8 Da

IEP (calculated)

6.550

GRAVY (calculated)

-0.804

Length

676 amino acids

Sequence
(BLAST)

001: MAGTSDRGSL MEDWMAMPPT PSPRTLMSSF LNEDFSSGQF SNFFGEHVSN KPHDQSEKRG ELVDLREQVP AQPPTAMPQK DFSLQPNSFN ANQKSNPQGS
101: LAERRASRAG FSIPKIDTSR VGSSTVIRSP IAIPPGLSPT TLLESPVFLY NSMAQPSPTT GKLFVASAAN STMPPDSTFS NDVFSFQPHS GPTSYSNVEK
201: GYNVCHQNQS MSNMHQQGSS LQSSFTAVKD SADEAIVKPK TSDSMFSDNH TSEEQEENEE DQNEEYSSAT NSNPGEDGYN WRKYGQKQVK SSEHPRSYYK
301: CTHPDCPVKK KVERSQDGQI TEIVYKSSHN HPLPPPNRRS GIPSSQINDP QVHVLERPGL HAGLNTASLW ENGKSECIQD AQGVEGRSAA CPPVSAYGDT
401: SIMESQDAAD VSSTLSNEID RATQGTISLD CDGGEDETES KRRKLDALAA VTLPTATTTS SIDMVAAASR AVREPRVVVQ TTSEVDILDD GYRWRKYGQK
501: VVKGNPNPRS YYKCTHQGCS VRKHVERASH DLKSVITTYE GKHNHEVPAA RNSGNGGSGS GSAQPSAPQA NISHRRQEQA QGSYPQFGGA TPFGSFGLPP
601: RGHLGAAGNF HFGMGPPGMS MPPMPAARHP PSMMQGYPGL MMQEGQMKPE PDQQSGFASA SAYQQMMGRP PFGPQM

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.