Factsheet for HORVU5Hr1G028340.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G108500.1	Wheat	nucleus	97.56	96.97
TraesCS5A01G104900.1	Wheat	nucleus	97.36	96.38
TraesCS5D01G116100.1	Wheat	nucleus	97.15	96.18
EES16036	Sorghum	nucleus	80.69	80.04
Zm00001d035323_P001	Maize	nucleus	80.49	79.84
Zm00001d041740_P001	Maize	nucleus	78.66	78.34
Os12t0507300-00	Rice	nucleus	60.77	74.94
GSMUA_Achr4P14270_001	Banana	nucleus	46.54	50.66
GSMUA_Achr4P07230_001	Banana	nucleus	46.75	48.94
GSMUA_Achr6P16760_001	Banana	nucleus	47.76	48.76
GSMUA_Achr7P26450_001	Banana	nucleus	46.75	48.12
GSMUA_Achr10P...	Banana	nucleus	44.92	47.73
KRH01236	Soybean	nucleus	48.17	45.58
KRH44949	Soybean	nucleus	48.17	45.32
VIT_14s0108g01280.t01	Wine grape	nucleus	47.76	44.59
HORVU4Hr1G048400.1	Barley	mitochondrion	47.15	43.86
AT3G01080.2	Thale cress	nucleus	38.21	40.78
PGSC0003DMT400003637	Potato	nucleus	35.98	39.25
Solyc02g088340.2.1	Tomato	nucleus	36.38	38.91
CDX74281	Canola	nucleus	34.76	37.92
Solyc03g104810.2.1	Tomato	nucleus	36.18	36.63
PGSC0003DMT400014220	Potato	nucleus	37.8	36.05
HORVU2Hr1G034420.2	Barley	nucleus	27.64	30.36
HORVU7Hr1G049130.1	Barley	nucleus, plastid	14.43	28.98
HORVU1Hr1G070250.2	Barley	nucleus, plastid	28.05	26.95
HORVU3Hr1G088200.4	Barley	nucleus, plastid	31.5	25.88
HORVU0Hr1G004890.10	Barley	nucleus	29.27	23.92
HORVU5Hr1G072020.1	Barley	nucleus	32.52	23.67
HORVU2Hr1G036320.1	Barley	nucleus	28.25	22.6
HORVU7Hr1G066670.4	Barley	nucleus	26.63	22.59

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287QRJ5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G028340	EnsemblPlants:HORVU5Hr1G028340.1	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF55	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B483B36	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:167139622..167146098

Molecular Weight (calculated)

52361.4 Da

IEP (calculated)

8.365

GRAVY (calculated)

-0.788

Length

492 amino acids

Sequence
(BLAST)

001: MSARPPPPPR PRLSLPPRST GESLFSGTGD ASPGPLTLAS ALFPSDADAD AGGGGGSGAS SGAGATSFTQ LLIGSLSQPP PHQQQERGRG GVVRAGPALS
101: VAPPAGAAVF TVPPGLSPSG FFDSPGLIFS PAMGGFGMSH QQALAQVTAQ ASHSPLRMFD HTEQPSFSAA ATSSGALQNM SSAANVAEMS EMATTISNNE
201: HAVFQSAEAS HRYQVPAPVD KPADDGYNWR KYGQKVVKGS DCPRSYYKCT HPSCPVKKKV EHAEDGQISE IIYKGKHNHQ RPPNKRAKDG SSSAAEQNEQ
301: SNDTASGLSG VRRDQEAVYG MSEQLSGLSD GDDKDDGESR PNEIDDRESH CKRRNIQISS QKALTESKII VQTTSEVDLL DDGYRWRKYG QKVVKGNPHP
401: RSYYKCTFAA CNVRKHIERA SSDPKAVITT YEGKHNHEPP VGRGSNQNGG NSNRAQQKGQ NSMSSNQASH ARTDLGNINQ GQIGVLQFKR EE

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.