Factsheet for TraesCS2B01G209200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G190500.1	Wheat	nucleus	94.02	96.07
TraesCS2A01G182700.1	Wheat	nucleus	95.3	95.91
HORVU2Hr1G034420.2	Barley	nucleus	80.98	84.6
Os07t0596900-00	Rice	nucleus	50.64	54.86
TraesCS4B01G165900.2	Wheat	nucleus	35.68	34.29
GSMUA_Achr4P14270_001	Banana	nucleus	32.05	33.19
GSMUA_Achr10P...	Banana	nucleus	32.48	32.83
GSMUA_Achr4P07230_001	Banana	nucleus	32.27	32.13
GSMUA_Achr7P26450_001	Banana	nucleus	32.48	31.8
GSMUA_Achr6P16760_001	Banana	nucleus	32.05	31.12
TraesCS5B01G108500.1	Wheat	nucleus	32.69	30.91
VIT_14s0108g01280.t01	Wine grape	nucleus	33.97	30.17
CDX74281	Canola	nucleus	29.06	30.16
AT3G01080.2	Thale cress	nucleus	29.27	29.72
KRH01236	Soybean	nucleus	32.69	29.42
KRH44949	Soybean	nucleus	32.69	29.25
Solyc03g104810.2.1	Tomato	nucleus	29.27	28.19
TraesCS5B01G401800.1	Wheat	nucleus	25.0	27.79
PGSC0003DMT400014220	Potato	nucleus	30.13	27.33
PGSC0003DMT400003637	Potato	nucleus	26.28	27.27
Solyc02g088340.2.1	Tomato	nucleus	26.5	26.96
TraesCS1B01G088900.2	Wheat	nucleus	26.07	26.64
TraesCS1B01G308200.1	Wheat	nucleus, plastid	25.64	23.58
TraesCS3B01G379200.1	Wheat	nucleus	27.99	23.43
TraesCS5B01G257300.1	Wheat	nucleus	29.7	20.47
TraesCS7B01G136400.2	Wheat	nucleus, plastid	26.5	19.59
TraesCS7B01G185400.2	Wheat	nucleus	21.15	18.97
TraesCS2B01G217400.2	Wheat	nucleus	24.79	18.89
TraesCS2B01G351600.1	Wheat	nucleus	26.28	16.85

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF18	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2B01G209200	EnsemblPlants:TraesCS2B01G209200.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:+:190968689..190971867

Molecular Weight (calculated)

50690.7 Da

IEP (calculated)

6.233

GRAVY (calculated)

-0.676

Length

468 amino acids

Sequence
(BLAST)

001: MAAGQWSGIG DGGGLWAPPA LDSLFPDDQP SPAASALGFF GGSLAQLPSP PPLCGTALLG YPQDNFDVFH EQDLAQLAAQ VAQKKELREK QGAGLHHKIG
101: PQLAFSKYSI LDQVDNSSSF SLATSVLTPQ HVSSSVGAAS MQGQTLPSHT GSGSVNTGPT GVLQVLQDSS TTLDSINTGS TGVLEALQGS SITLDRPADD
201: GYNWRKYGQK AVKGGKYPRS YYKCTLNCPV RKNVEHSADG RIIKIIYRGQ HCHEPPSKRF KDCGDLLNEL NDFNDAKEPS TKSQLGCQGY YGKPITPNGM
301: MTDVLLPTKE EGDEQLSSLS DIREGDGEIR TVDGDDGDAD ANERNAPGQK IIVSTTSDVD LLDDGYRWRK YGQKVVRGNP HPRSYYKCTY QGCDVKKHIE
401: RSSEEPHAVI TTYEGKHTHD VPESRNRSQA TGQHHCKEQT YSEQSAASFC SSSEKRKYGT AILNDLAF

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.