Factsheet for TraesCS5D01G303300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G122700.4
TraesCS5B01G122600.1
TraesCS5B01G565100.3
TraesCS5D01G130900.2
TraesCS5D01G549600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G59580.1	TraesCS5A01G122700.4	AT5G40440.1	19513235
AT1G59580.1	TraesCS5B01G122600.1	AT5G40440.1	19513235
AT1G59580.1	TraesCS5B01G565100.3	AT5G40440.1	19513235
AT1G59580.1	TraesCS5D01G130900.2	AT5G40440.1	19513235
AT1G59580.1	TraesCS5D01G549600.1	AT5G40440.1	19513235
AT2G18170.1	TraesCS5A01G122700.4	AT5G40440.1	19513235
AT2G18170.1	TraesCS5B01G122600.1	AT5G40440.1	19513235
AT2G18170.1	TraesCS5B01G565100.3	AT5G40440.1	19513235
AT2G18170.1	TraesCS5D01G130900.2	AT5G40440.1	19513235
AT2G18170.1	TraesCS5D01G549600.1	AT5G40440.1	19513235
AT4G36450.1	TraesCS5A01G122700.4	AT5G40440.1	19513235
AT4G36450.1	TraesCS5B01G122600.1	AT5G40440.1	19513235
AT4G36450.1	TraesCS5B01G565100.3	AT5G40440.1	19513235
AT4G36450.1	TraesCS5D01G130900.2	AT5G40440.1	19513235
AT4G36450.1	TraesCS5D01G549600.1	AT5G40440.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G078060.5	Barley	cytosol	66.67	75.29
TraesCS5B01G295300.1	Wheat	cytosol	89.56	73.89
TraesCS5A01G295800.1	Wheat	cytosol	70.03	69.57
Os06t0699400-01	Rice	cytosol, mitochondrion	85.19	68.56
EER88895	Sorghum	cytosol	85.19	68.56
TraesCS7D01G414700.1	Wheat	cytosol	84.51	68.02
Zm00001d014658_P005	Maize	cytosol	83.5	67.21
TraesCS7D01G414900.1	Wheat	cytosol	83.5	65.78
TraesCS6D01G108100.1	Wheat	cytosol	82.15	63.87
Bra019955.1-P	Field mustard	cytosol	77.44	62.33
CDX93447	Canola	cytosol	77.44	62.33
PGSC0003DMT400009491	Potato	cytosol	77.78	62.1
Solyc04g080730.2.1	Tomato	cytosol	77.78	62.1
CDX94915	Canola	cytosol	77.1	62.06
AT1G10210.2	Thale cress	cytosol	77.1	61.89
VIT_18s0001g13010.t01	Wine grape	cytosol	77.44	61.17
CDY45885	Canola	cytosol	75.76	60.81
Bra035437.1-P	Field mustard	cytosol	75.76	60.81
CDY44551	Canola	cytosol	75.42	60.54
KRH51805	Soybean	cytosol	75.42	60.38
KRH61130	Soybean	cytosol	75.42	60.38
AT1G59580.1	Thale cress	cytosol	76.09	60.11
KRH58939	Soybean	cytosol	74.41	60.05
AT2G18170.1	Thale cress	cytosol	74.07	59.78
VIT_04s0023g02420.t01	Wine grape	cytosol, nucleus, peroxisome	74.07	59.78
Bra039629.1-P	Field mustard	cytosol	73.74	59.51
CDY46308	Canola	cytosol	73.74	59.51
Bra037234.1-P	Field mustard	cytosol	73.06	58.97
AT4G36450.1	Thale cress	cytosol	71.04	58.45
PGSC0003DMT400009066	Potato	cytosol	71.38	57.3
Solyc02g084870.2.1	Tomato	cytosol	71.38	57.3
KRH42844	Soybean	cytosol	74.41	55.39
CDY53276	Canola	cytosol	72.73	51.67
CDY30325	Canola	endoplasmic reticulum, plasma membrane	73.4	46.58
TraesCS1D01G192200.1	Wheat	cytosol	51.18	40.43
TraesCS4D01G198600.1	Wheat	cytosol	49.83	40.11
TraesCS7D01G106400.1	Wheat	cytosol	51.52	38.93
TraesCS7D01G295900.1	Wheat	cytosol	50.17	38.5
TraesCS7D01G342800.3	Wheat	cytosol	39.39	27.79
TraesCS6D01G082900.2	Wheat	peroxisome	39.39	23.17
TraesCS3D01G221700.1	Wheat	cytosol	36.7	22.34
TraesCS1D01G088000.2	Wheat	cytosol	39.39	21.16
TraesCS1D01G410100.1	Wheat	cytosol	38.72	20.72
TraesCS7D01G403700.1	Wheat	cytosol	40.4	20.65
TraesCS3D01G242200.2	Wheat	cytosol	39.73	20.21
TraesCS3D01G225600.1	Wheat	cytosol	41.08	19.9
TraesCS1D01G422800.1	Wheat	mitochondrion	40.4	19.83
TraesCS1D01G428900.1	Wheat	cytosol	39.73	19.7

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF216
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5D01G303300	EnsemblPlants:TraesCS5D01G303300.1

Description

No Description!

Coordinates

chr5D:-:398908233..398910108

Molecular Weight (calculated)

33826.6 Da

IEP (calculated)

8.647

GRAVY (calculated)

-0.110

Length

297 amino acids

Sequence
(BLAST)

001: MAKMVDPPKG KGNHGKHYYI MCETMFEIDT KYVPIKPIGK RSLRTLRELK LLRHLSHENV IALKDVMMPI QRRNFKDVYL VAGLMDTDLQ KIINSSITLS
101: NDHCQYLLFQ LLRGLKYLHS AGILHRDLKP GNLLVNGNLF MTEYVVTRWY RAPELLLSCD NYGTSIDVWS VGCILAELLG RKSIFPGTDC LNQLKLIVNV
201: LGTMSDDDLE FIGNMKARKY IKSLSYTAGI PLTRMYPQAH PLAIDLLQKM LVFDPSKRIS VTEALEHPYM SVLYDPSANP PAQAPIDLDI DENSAWR

Best Arabidopsis Sequence Match ( AT1G10210.1 )
(BLAST)

001: MATLVDPPNG IRNEGKHYFS MWQTLFEIDT KYMPIKPIGR GAYGVVCSSV NSDTNEKVAI KKIHNVYENR IDALRTLREL KLLRHLRHEN VIALKDVMMP
101: IHKMSFKDVY LVYELMDTDL HQIIKSSQVL SNDHCQYFLF QLLRGLKYIH SANILHRDLK PGNLLVNANC DLKICDFGLA RASNTKGQFM TEYVVTRWYR
201: APELLLCCDN YGTSIDVWSV GCIFAELLGR KPIFQGTECL NQLKLIVNIL GSQREEDLEF IDNPKAKRYI RSLPYSPGMS LSRLYPGAHV LAIDLLQKML
301: VFDPSKRISV SEALQHPYMA PLYDPNANPP AQVPIDLDVD EDLREEMIRE MMWNEMLHYH PQASTLNTEL

Arabidopsis Description

MPK1MPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6I4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.