Factsheet for TraesCS5B01G122600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G295800.1
TraesCS5B01G295300.1
TraesCS5D01G303300.1
TraesCS6A01G118100.1
TraesCS6B01G146300.1
TraesCS6D01G108100.1
TraesCS7A01G029700.1
TraesCS7A01G422500.1
TraesCS7B01G322900.1
TraesCS7D01G414700.1
TraesCS7D01G414900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40440.1	TraesCS5A01G295800.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS5B01G295300.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS5D01G303300.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS6A01G118100.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS6B01G146300.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS6D01G108100.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7A01G029700.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7A01G422500.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7B01G322900.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7D01G414700.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7D01G414900.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS5A01G295800.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS5B01G295300.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS5D01G303300.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS6A01G118100.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS6B01G146300.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS6D01G108100.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7A01G029700.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7A01G422500.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7B01G322900.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7D01G414700.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7D01G414900.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS5A01G295800.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS5B01G295300.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS5D01G303300.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS6A01G118100.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS6B01G146300.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS6D01G108100.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7A01G029700.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7A01G422500.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7B01G322900.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7D01G414700.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7D01G414900.1	AT4G36450.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G122700.4	Wheat	cytosol	60.08	95.65
TraesCS5D01G130900.2	Wheat	cytosol	92.86	84.19
GSMUA_Achr9P18710_001	Banana	cytosol	39.08	62.84
VIT_14s0066g00670.t01	Wine grape	cytosol	56.72	52.12
KRH56582	Soybean	cytosol	55.67	51.16
KRG93261	Soybean	cytosol	55.67	50.38
CDY50119	Canola	cytosol	54.2	49.81
Bra025576.1-P	Field mustard	cytosol	53.99	49.61
CDY42585	Canola	cytosol	53.99	49.61
TraesCS5B01G565100.3	Wheat	cytosol	54.62	49.52
Solyc03g019850.2.1	Tomato	cytosol	53.57	49.51
PGSC0003DMT400039329	Potato	cytosol	53.57	49.51
AT5G40440.1	Thale cress	cytosol	53.78	49.23
GSMUA_Achr9P18700_001	Banana	cytosol	19.96	41.48
TraesCS4B01G315300.1	Wheat	cytosol	26.89	36.06
TraesCS7B01G059000.1	Wheat	plastid	22.69	31.3
TraesCS1B01G419600.1	Wheat	cytosol	7.77	30.83
TraesCS4B01G239400.1	Wheat	mitochondrion	20.17	29.0
TraesCS4B01G048600.1	Wheat	mitochondrion	20.38	28.78
TraesCS6B01G379500.1	Wheat	cytosol, plastid	22.48	28.76
TraesCS4B01G048900.1	Wheat	cytosol, mitochondrion	20.17	28.74
TraesCS4B01G048100.1	Wheat	mitochondrion	20.17	27.99
TraesCS3B01G066300.1	Wheat	cytosol, mitochondrion	19.75	27.81
TraesCS4B01G049000.1	Wheat	cytosol, mitochondrion	19.33	27.22
TraesCS1B01G419300.1	Wheat	plasma membrane	19.12	21.72
TraesCS1B01G419400.1	Wheat	plastid	14.71	21.34
TraesCS6B01G177800.1	Wheat	cytosol	18.91	16.61
TraesCS5B01G196400.1	Wheat	cytosol	18.07	16.6
TraesCS2B01G249900.1	Wheat	cytosol	20.59	14.16
TraesCS7B01G130700.1	Wheat	cytosol	19.54	13.29
TraesCS6B01G386100.1	Wheat	cytosol	19.12	13.09
TraesCS1B01G199100.2	Wheat	cytosol	19.54	12.85
TraesCS4B01G398400.3	Wheat	mitochondrion	18.91	12.1
TraesCS4B01G395600.1	Wheat	nucleus	14.71	11.13
TraesCS5B01G397300.1	Wheat	cytosol	19.75	10.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.10.450.50	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR018222	InterPro:Kinase-like_dom_sf	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50177	PANTHER:PTHR24361	PANTHER:PTHR24361:SF487
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF54427	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5B01G122600	EnsemblPlants:TraesCS5B01G122600.1	TIGR:cd06623	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:-:220811526..220817597

Molecular Weight (calculated)

53818.9 Da

IEP (calculated)

5.920

GRAVY (calculated)

-0.311

Length

476 amino acids

Sequence
(BLAST)

001: MAGLEDLKRR LQPIFFDADG NVVPPPAADG TSDDSSSDDC EVLDGGTVNL LSRSSDEYNI SKLGFHKRTT RPDGDYATDK AYRCSCHDMH IFDSVGNGAS
101: SVVYRAIYVP VHRVLALKKI NIFDKERRQQ ILNEIRTLSA ASCYPGLVEF QGVFYTPDSG EIYFALEYMD GGSLADIIRV KKFITEPVLS HMLQKVLLAL
201: RYLHEVRRLV HRDIKPANLL LNLKGDTKIT DFGVTSGLHD SVTMCATFLG SVTYMSPERI RNENYSYAAD IWSLGLTALE CATGRYPYDV NGGEADLMLQ
301: ILEDPSPTPP QHMHSEEFCL FIDACLQKDA DARPTCDELL SHSFIKKYEG PGVDLAEYNR SVHDPAERLS QIAHMLAVHY YLIFDGGDDQ WHHMKSFYGQ
401: DSTFSFSGET HVGKSDIFDT LSRIREMLKG NSRCEKIGRV MEKVYSCTWG RRDECSSFWI IHYGERVPCV RRWVLC

Best Arabidopsis Sequence Match ( AT5G40440.6 )
(BLAST)

001: MFLVCLLLSS FCLFVKLSDG GTVNLLSRSY GVYNFNELGL QKCTSSHVDE SESSETTYQC ASHEMRVFGA IGSGASSVVQ RAIHIPNHRI LALKKINIFE
101: REKRQQLLTE IRTLCEAPCH EGLVDFHGAF YSPDSGQISI ALEYMNGGSL ADILKVTKKI PEPVLSSLFH KLLQGLSYLH GVRHLVHRDI KPANLLINLK
201: GEPKITDFGI SAGLENSMAM CATFVGTVTY MSPERIRNDS YSYPADIWSL GLALFECGTG EFPYIANEGP VNLMLQILDD PSPTPPKQEF SPEFCSFIDA
301: CLQKDPDARP TADQLLSHPF ITKHEKERVD LATFVQSIFD PTQRLKDLAD MLTIHYYSLF DGFDDLWHHA KSLYTETSVF SFSGKHNTGS TEIFSALSDI
401: RNTLTGDLPS EKLVHVVEKL HCKPCGSGGV IIRAVGSFIV GNQFLICGDG VQAEGLPSFK DLGFDVASRR VGRFQEQFVV ESGDLIGKYF LAKQELYITN
501: LD

Arabidopsis Description

MKK3Mitogen-activated protein kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80396]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.