Factsheet for TraesCS5D01G130900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G295800.1
TraesCS5B01G295300.1
TraesCS5D01G303300.1
TraesCS6A01G118100.1
TraesCS6B01G146300.1
TraesCS6D01G108100.1
TraesCS7A01G029700.1
TraesCS7A01G422500.1
TraesCS7B01G322900.1
TraesCS7D01G414700.1
TraesCS7D01G414900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40440.1	TraesCS5A01G295800.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS5B01G295300.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS5D01G303300.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS6A01G118100.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS6B01G146300.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS6D01G108100.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7A01G029700.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7A01G422500.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7B01G322900.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7D01G414700.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS7D01G414900.1	AT1G59580.1	19513235
AT5G40440.1	TraesCS5A01G295800.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS5B01G295300.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS5D01G303300.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS6A01G118100.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS6B01G146300.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS6D01G108100.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7A01G029700.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7A01G422500.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7B01G322900.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7D01G414700.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS7D01G414900.1	AT2G18170.1	19513235
AT5G40440.1	TraesCS5A01G295800.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS5B01G295300.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS5D01G303300.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS6A01G118100.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS6B01G146300.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS6D01G108100.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7A01G029700.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7A01G422500.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7B01G322900.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7D01G414700.1	AT4G36450.1	19513235
AT5G40440.1	TraesCS7D01G414900.1	AT4G36450.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G122700.4	Wheat	cytosol	55.24	96.99
TraesCS5B01G122600.1	Wheat	cytosol	84.19	92.86
TraesCS5D01G549600.1	Wheat	cytosol	65.33	65.58
GSMUA_Achr9P18710_001	Banana	cytosol	36.0	63.85
VIT_14s0066g00670.t01	Wine grape	cytosol	59.43	60.23
KRH56582	Soybean	cytosol	58.29	59.07
KRG93261	Soybean	cytosol	58.29	58.17
GSMUA_Achr9P18700_001	Banana	cytosol	25.14	57.64
PGSC0003DMT400039329	Potato	cytosol	55.81	56.89
Solyc03g019850.2.1	Tomato	cytosol	55.81	56.89
CDY50119	Canola	cytosol	55.81	56.56
Bra025576.1-P	Field mustard	cytosol	55.62	56.37
CDY42585	Canola	cytosol	55.62	56.37
AT5G40440.1	Thale cress	cytosol	55.43	55.96
TraesCS4D01G312300.3	Wheat	cytosol	24.38	36.06
TraesCS7D01G092900.1	Wheat	cytosol	21.52	32.38
TraesCS7D01G155100.1	Wheat	plastid	20.95	31.52
TraesCS6D01G328800.1	Wheat	cytosol, plastid	20.76	29.62
TraesCS4D01G239400.1	Wheat	mitochondrion	18.29	28.92
TraesCS4D01G048800.1	Wheat	cytosol, mitochondrion	18.1	28.44
TraesCS4D01G048500.1	Wheat	mitochondrion	18.1	27.7
TraesCS4D01G049100.1	Wheat	cytosol, mitochondrion	17.71	27.51
TraesCS1D01G399400.1	Wheat	cytosol, mitochondrion, plastid, vacuole	18.1	27.14
TraesCS4D01G047900.1	Wheat	mitochondrion	17.52	26.36
TraesCS6D01G139200.1	Wheat	cytosol	17.33	17.88
TraesCS5D01G203600.1	Wheat	cytosol	16.38	16.6
TraesCS2D01G232200.1	Wheat	cytosol	19.43	14.74
TraesCS6D01G335800.1	Wheat	cytosol	18.48	13.96
TraesCS7D01G232400.1	Wheat	cytosol	18.67	13.82
TraesCS1D01G185000.2	Wheat	cytosol, mitochondrion, nucleus	18.29	13.13
TraesCS5D01G402300.1	Wheat	cytosol	18.48	11.8

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.10.450.50	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR018222	InterPro:Kinase-like_dom_sf	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50177	PANTHER:PTHR24361	PANTHER:PTHR24361:SF487
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF54427	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5D01G130900	EnsemblPlants:TraesCS5D01G130900.2	TIGR:cd06623	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:207244806..207252243

Molecular Weight (calculated)

58605.7 Da

IEP (calculated)

5.334

GRAVY (calculated)

-0.242

Length

525 amino acids

Sequence
(BLAST)

001: MAGLEELKRR LQPIFFDADG NVVPPPAADG TSDDSSSDDC EVLDGGTVNL LSRSSDEYNI SKLGFHKRTT RPDGDYATDK AYRCCCHDMH IFDSVGNGAS
101: SVVHRAIYVP VHRVLALKKI NIFDKEKRQQ ILNEIRTLSA ASCYPGLVEF QGVFYTPDSG EIYFALEYMD GGSLADIIRV KKFITEPVLS HMLQKVLLAL
201: RYLHEVRRLV HRDIKPANLL LNLKGDTKIT DFGVSSGLHD SVTMCATFLG SVTYMSPERI RNENYSYAAD IWSLGLTALE CATGRYPYDV NGGEADLMLQ
301: ILEDPSPTPP QHMHSEEFCS FIDACLQKDA DARPTCDQLL SHSFIKKYEG PGVDLAEYNK SVHDPAERLS QIAHMLAVHY YLIFDGGDDQ WRHMKSFYGQ
401: DSTFSFSGET HVGKSDIFDT LSRIREMLKG NSRCEKIGRV MEKVYCRAHG EEGMSVRVSG SFIMGNEFLV CADGFCAEGM LSIVELSPDI LSKQAGHFQE
501: DFFMEPGTAM GCYVISRQEL HIGVS

Best Arabidopsis Sequence Match ( AT5G40440.4 )
(BLAST)

001: MAALEELKKK LSPLFDAEKG FSSSSSLDPN DSYLLSDGGT VNLLSRSYGV YNFNELGLQK CTSSHVDESE SSETTYQCAS HEMRVFGAIG SGASSVVQRA
101: IHIPNHRILA LKKINIFERE KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMNGGSLAD ILKVTKKIPE PVLSSLFHKL LQGLSYLHGV
201: RHLVHRDIKP ANLLINLKGE PKITDFGISA GLENSMAMCA TFVGTVTYMS PERIRNDSYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS
301: PTPPKQEFSP EFCSFIDACL QKDPDARPTA DQLLSHPFIT KHEKERVDLA TFVQSIFDPT QRLKDLADML TIHYYSLFDG FDDLWHHAKS LYTETSVFSF
401: SGKHNTGSTE IFSALSDIRN TLTGDLPSEK LVHVVEKLHC KPCGSGGVII RAVGSFIVGN QFLICGDGVQ AEGLPSFKDL GFDVASRRVG RFQEQFVVES
501: GDLIGKYFLA KQELYITNLD

Arabidopsis Description

MKK3Mitogen-activated protein kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80396]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.