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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_04s0023g02420.t01
VIT_18s0001g13010.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G40440.1 VIT_18s0001g13010.t01 AT1G59580.1 19513235
AT5G40440.1 VIT_04s0023g02420.t01 AT2G18170.1 19513235
AT5G40440.1 VIT_04s0023g02420.t01 AT4G36450.1 19513235
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH56582 Soybean cytosol 83.2 83.2
KRG93261 Soybean cytosol 83.78 82.51
PGSC0003DMT400039329 Potato cytosol 81.47 81.94
Solyc03g019850.2.1 Tomato cytosol 81.27 81.75
CDY50119 Canola cytosol 78.76 78.76
CDY42585 Canola cytosol 78.57 78.57
AT5G40440.1 Thale cress cytosol 78.76 78.46
Bra025576.1-P Field mustard cytosol 78.38 78.38
GSMUA_Achr9P18710_001 Banana cytosol 44.79 78.38
Os06t0473200-02 Rice cytosol 49.81 72.68
KXG24971 Sorghum cytosol 71.24 70.55
HORVU5Hr1G125270.1 Barley cytosol 50.58 70.05
TraesCS5D01G549600.1 Wheat cytosol 67.57 66.92
TraesCS5A01G122700.4 Wheat cytosol 38.61 66.89
Zm00001d013510_P002 Maize cytosol 41.12 66.56
HORVU5Hr1G125290.3 Barley cytosol 66.99 66.35
GSMUA_Achr9P18700_001 Banana cytosol 29.15 65.94
Zm00001d041092_P001 Maize plasma membrane 70.85 61.89
TraesCS5D01G130900.2 Wheat cytosol 60.23 59.43
TraesCS5B01G122600.1 Wheat cytosol 52.12 56.72
TraesCS5B01G565100.3 Wheat cytosol 52.12 51.43
VIT_11s0016g02970.t01 Wine grape cytosol 26.64 38.98
VIT_11s0016g01770.t01 Wine grape cytosol, nucleus, plasma membrane 26.45 38.7
VIT_17s0000g01970.t01 Wine grape cytosol 22.01 36.31
VIT_09s0018g01820.t01 Wine grape plastid 23.17 28.57
VIT_01s0127g00690.t01 Wine grape cytosol 16.41 21.68
Zm00001d004610_P001 Maize cytosol 6.56 18.99
VIT_09s0018g01390.t01 Wine grape cytosol 18.53 16.35
VIT_05s0049g00060.t01 Wine grape cytosol 16.6 15.84
VIT_14s0066g01170.t01 Wine grape cytosol 18.92 14.8
VIT_19s0014g02310.t01 Wine grape cytosol 19.5 14.31
VIT_02s0025g02480.t01 Wine grape cytosol 19.11 13.58
VIT_01s0011g00300.t01 Wine grape cytosol 19.69 12.27
Protein Annotations
Gene3D:1.10.510.10EntrezGene:100257776wikigene:100257776MapMan:18.4.2.1Gene3D:3.10.450.50Gene3D:3.30.200.20
ProteinID:CBI34873ProteinID:CBI34873.3UniProt:D7TWJ8EMBL:FN596252GO:GO:0000165GO:GO:0000166
GO:GO:0000187GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004707
GO:GO:0004708GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0006950
GO:GO:0007049GO:GO:0007154GO:GO:0007165GO:GO:0007346GO:GO:0008150GO:GO:0008152
GO:GO:0009605GO:GO:0009607GO:GO:0009719GO:GO:0009737GO:GO:0009738GO:GO:0009814
GO:GO:0009864GO:GO:0009866GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0023014GO:GO:0031098GO:GO:0032147InterPro:IPR000719InterPro:IPR018222InterPro:Kinase-like_dom_sf
EntrezGene:LOC100257776wikigene:LOC100257776InterPro:NTF2-like_dom_sfInterPro:Nuclear_transport_factor_2_eukPFAM:PF00069ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50177PANTHER:PTHR24361PANTHER:PTHR24361:SF487InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF54427SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00015C9E8F
ArrayExpress:VIT_14s0066g00670EnsemblPlantsGene:VIT_14s0066g00670EnsemblPlants:VIT_14s0066g00670.t01unigene:Vvi.11864RefSeq:XP_002274862RefSeq:XP_002274862.1
RefSeq:XP_010660866.1RefSeq:XP_019080852.1::::
Description
No Description!
Coordinates
chr14:-:27139067..27144949
Molecular Weight (calculated)
57486.2 Da
IEP (calculated)
5.728
GRAVY (calculated)
-0.103
Length
518 amino acids
Sequence
(BLAST)
001: MAGLEELKKK LSPLFDPDKG LSAGSTLDPC DSYMLSDGGT VNLLSKSCGV YNINELGLLK CSSSPVDEAD YKERTYRCAS HEMRIFGAIG SGASSVVQRA
101: IHIPTHRIIA LKKINIFEKE KRQQLLTEIR MLCEAPCYEG LVEFHGAFYT PDSGQISIAL EYMDGGSLAD VIRVQKCIPE PVLSSMVRKL LHGLCYLHGV
201: RHLVHRDIKP ANLLVNLKGE PKITDFGISA GLENSVAMCA TFVGTVTYMS PERIRNENYS YPADIWSLGL ALFECGTGEF PYTANEGPVN LMLQILDDPS
301: PSPPKHIFSA EFCSFIDACL QKDADARPTA EQLLSHPFIT KYEHARVDLT AFVRSIFDPT QKMKDLADML MIHYYLLFDG PDDLWQHTKT LYKKDSTFSF
401: SGKQSVGSDD IFATLSGIRS TLVGDWPPER LVHVVEKLQC RGHGQDGVAI RVSGSFIVGN QFLICGDGVQ VEGLPSFKDL SIEISSNRMG TFQEQFIMEP
501: GDAIGRYFIT KQDLYIIQ
Best Arabidopsis Sequence Match ( AT5G40440.4 )
(BLAST)
001: MAALEELKKK LSPLFDAEKG FSSSSSLDPN DSYLLSDGGT VNLLSRSYGV YNFNELGLQK CTSSHVDESE SSETTYQCAS HEMRVFGAIG SGASSVVQRA
101: IHIPNHRILA LKKINIFERE KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMNGGSLAD ILKVTKKIPE PVLSSLFHKL LQGLSYLHGV
201: RHLVHRDIKP ANLLINLKGE PKITDFGISA GLENSMAMCA TFVGTVTYMS PERIRNDSYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS
301: PTPPKQEFSP EFCSFIDACL QKDPDARPTA DQLLSHPFIT KHEKERVDLA TFVQSIFDPT QRLKDLADML TIHYYSLFDG FDDLWHHAKS LYTETSVFSF
401: SGKHNTGSTE IFSALSDIRN TLTGDLPSEK LVHVVEKLHC KPCGSGGVII RAVGSFIVGN QFLICGDGVQ AEGLPSFKDL GFDVASRRVG RFQEQFVVES
501: GDLIGKYFLA KQELYITNLD
Arabidopsis Description
MKK3Mitogen-activated protein kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80396]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.