Factsheet for VIT_04s0023g02420.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_14s0066g00670.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18170.1	VIT_14s0066g00670.t01	AT5G40440.1	19513235
AT4G36450.1	VIT_14s0066g00670.t01	AT5G40440.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58939	Soybean	cytosol	83.42	83.42
Zm00001d014658_P005	Maize	cytosol	83.15	82.93
EER88895	Sorghum	cytosol	82.88	82.66
PGSC0003DMT400009066	Potato	cytosol	82.61	82.16
Solyc02g084870.2.1	Tomato	cytosol	82.34	81.89
Os06t0699400-01	Rice	cytosol, mitochondrion	82.07	81.84
AT2G18170.1	Thale cress	cytosol	81.79	81.79
Bra037234.1-P	Field mustard	cytosol	81.79	81.79
EES06273	Sorghum	cytosol	82.07	81.62
Bra039629.1-P	Field mustard	cytosol	81.25	81.25
CDY46308	Canola	cytosol	81.25	81.25
Zm00001d015269_P001	Maize	cytosol	81.52	81.08
Os02t0148100-01	Rice	cytosol, plasma membrane	81.52	81.08
VIT_18s0001g13010.t01	Wine grape	cytosol	82.61	80.85
TraesCS7D01G414700.1	Wheat	cytosol	80.71	80.49
AT4G36450.1	Thale cress	cytosol	78.8	80.33
HORVU7Hr1G097740.1	Barley	cytosol	80.43	80.22
HORVU4Hr1G049430.1	Barley	cytosol	80.43	80.22
TraesCS6B01G146300.1	Wheat	cytosol	80.43	80.22
TraesCS7B01G322900.1	Wheat	cytosol	80.16	78.25
TraesCS6A01G118100.1	Wheat	cytosol	80.16	77.63
TraesCS6D01G108100.1	Wheat	cytosol	80.43	77.49
KRH42844	Soybean	cytosol	83.42	76.94
TraesCS7D01G414900.1	Wheat	cytosol	78.8	76.92
HORVU6Hr1G021480.1	Barley	cytosol	80.43	76.88
TraesCS5A01G295800.1	Wheat	cytosol	61.41	75.59
TraesCS5B01G295300.1	Wheat	cytosol	73.37	75.0
HORVU5Hr1G078060.5	Barley	cytosol	53.26	74.52
TraesCS5D01G303300.1	Wheat	cytosol	59.78	74.07
CDY53276	Canola	cytosol	81.25	71.53
TraesCS7A01G422500.1	Wheat	plastid	80.43	70.98
TraesCS7A01G029700.1	Wheat	cytosol	61.14	69.44
CDY30325	Canola	endoplasmic reticulum, plasma membrane	81.79	64.32
VIT_06s0004g03620.t01	Wine grape	cytosol	54.62	54.18
VIT_02s0025g00270.t01	Wine grape	cytosol	54.62	53.6
VIT_06s0004g03540.t01	Wine grape	cytosol	53.8	52.8
VIT_15s0046g02010.t01	Wine grape	cytosol	53.53	52.53
VIT_05s0094g00900.t01	Wine grape	cytosol	53.8	49.75
VIT_05s0020g02530.t01	Wine grape	cytosol	43.48	28.42
VIT_19s0014g00220.t01	Wine grape	cytosol	45.11	27.76
VIT_17s0000g02570.t01	Wine grape	mitochondrion	44.84	27.45
VIT_12s0142g00130.t01	Wine grape	cytosol	44.02	26.56
VIT_01s0011g04920.t01	Wine grape	cytosol	44.02	26.43

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	EntrezGene:100242068	wikigene:100242068	MapMan:18.4.3.6	Gene3D:3.30.200.20
EMBL:AM484540	ProteinID:CAN70944	ProteinID:CAN70944.1	ProteinID:CCB44417	ProteinID:CCB44417.1	UniProt:F6GWT2
EMBL:FN594959	GO:GO:0000165	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010468
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100242068	wikigene:LOC100242068	InterPro:MAP_kinase_CS	PFAM:PF00069	PFAM:PF12330	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF196
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CB9B5
ArrayExpress:VIT_04s0023g02420	EnsemblPlantsGene:VIT_04s0023g02420	EnsemblPlants:VIT_04s0023g02420.t01	RefSeq:XP_002276158	RefSeq:XP_002276158.1	:

Description

Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:F6GWT2]

Coordinates

chr4:+:18972891..18976842

Molecular Weight (calculated)

42712.0 Da

IEP (calculated)

7.954

GRAVY (calculated)

-0.224

Length

368 amino acids

Sequence
(BLAST)

001: MATRVEPPNG FRSQGKHYYT MWQTLFEIDT KYVPIKPIGR GSYGVVCSSV NMETNEKVAI KKINNVFENR VDALRTLREL KLLRHIQHEN VIALKDVMMP
101: THQTSFKDVY LVYELMDTDL HHIIKSPQPL VNEHCKYFIF QLLRGLKYLH SANILHRDLK PGNLLVNANC DLKICDFGLA RTSKDNGQFM TEYVVTRWYR
201: APELLLCCDN YGTSIDVWSV GCIFAEILGR EPIFPGTECL NQLKLIINVL GTQHEADLQF IDNPKARKYI KSLPYFRGVH FSHLYPRADP LAIDLLRRML
301: VFDPTKRITV TEALQHPYLS NLYDPSCNPS AQVSINLDID ENLQVRMIRE MMWREMLHYH PEAVCSHA

Best Arabidopsis Sequence Match ( AT2G18170.1 )
(BLAST)

001: MAMLVEPPNG IKQQGKHYYS MWQTLFEIDT KYVPIKPIGR GAYGVVCSSI NRETNERVAI KKIHNVFENR VDALRTLREL KLLRHVRHEN VIALKDVMLP
101: ANRSSFKDVY LVYELMDTDL HQIIKSSQSL SDDHCKYFLF QLLRGLKYLH SANILHRDLK PGNLLVNANC DLKICDFGLA RTSQGNEQFM TEYVVTRWYR
201: APELLLCCDN YGTSIDVWSV GCIFAEILGR KPIFPGTECL NQLKLIINVV GSQQESDIRF IDNPKARRFI KSLPYSRGTH LSNLYPQANP LAIDLLQRML
301: VFDPTKRISV TDALLHPYMA GLFDPGSNPP AHVPISLDID ENMEEPVIRE MMWNEMLYYH PEAEISNA

Arabidopsis Description

MPK7Mitogen-activated protein kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39027]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.