Factsheet for VIT_05s0020g02530.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_13s0019g04710.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19010.1	VIT_13s0019g04710.t01	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50997	Soybean	cytosol	34.99	95.17
KRH20928	Soybean	cytosol	89.7	89.7
KRH11360	Soybean	cytosol	88.99	89.3
Solyc01g080240.2.1	Tomato	cytosol	87.21	86.9
PGSC0003DMT400011138	Potato	cytosol	87.21	86.9
Bra002201.1-P	Field mustard	cytosol	75.13	84.1
CDX92566	Canola	cytosol	82.95	83.24
CDY13942	Canola	cytosol	82.77	83.21
AT5G19010.1	Thale cress	cytosol	83.48	82.89
KRH02140	Soybean	cytosol	77.62	82.77
Bra006490.1-P	Field mustard	cytosol	81.71	82.44
Os11t0271100-01	Rice	cytosol, plasma membrane	72.82	82.33
CDY66706	Canola	cytosol	81.71	82.29
CDX70861	Canola	cytosol	81.53	82.11
Os05t0143500-02	Rice	cytosol	76.02	78.97
Zm00001d006790_P006	Maize	cytosol	76.02	78.68
KXG28281	Sorghum	cytosol	74.78	77.96
KXG21277	Sorghum	cytosol	76.91	77.88
Zm00001d024807_P008	Maize	cytosol	76.38	77.2
TraesCS1A01G086500.1	Wheat	cytosol	74.42	76.32
HORVU1Hr1G018740.1	Barley	cytosol	74.25	76.14
TraesCS1B01G104900.1	Wheat	cytosol	73.71	75.59
TraesCS1D01G088000.2	Wheat	cytosol	74.25	75.59
KRH50993	Soybean	cytosol	42.27	65.38
VIT_12s0142g00130.t01	Wine grape	cytosol	66.96	61.8
VIT_17s0000g02570.t01	Wine grape	mitochondrion	64.48	60.4
VIT_19s0014g00220.t01	Wine grape	cytosol	63.94	60.2
VIT_01s0011g04920.t01	Wine grape	cytosol	62.88	57.75
VIT_06s0004g03540.t01	Wine grape	cytosol	31.44	47.2
VIT_06s0004g03620.t01	Wine grape	cytosol	30.02	45.55
VIT_02s0025g00270.t01	Wine grape	cytosol	30.02	45.07
VIT_04s0023g02420.t01	Wine grape	cytosol, nucleus, peroxisome	28.42	43.48
VIT_18s0001g13010.t01	Wine grape	cytosol	28.95	43.35
VIT_05s0094g00900.t01	Wine grape	cytosol	30.55	43.22
VIT_15s0046g02010.t01	Wine grape	cytosol	28.6	42.93

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	EntrezGene:100246022	wikigene:100246022	MapMan:18.4.3.6	Gene3D:3.30.200.20
ProteinID:CBI26170	ProteinID:CBI26170.3	UniProt:D7T6P9	EMBL:FN595749	GO:GO:0000165	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010468	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246022	wikigene:LOC100246022	InterPro:MAP_kinase_CS
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF211
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	TIGR:TC58000	TIGR:TC62991
UniParc:UPI0001BE2C18	ArrayExpress:VIT_05s0020g02530	EnsemblPlantsGene:VIT_05s0020g02530	EnsemblPlants:VIT_05s0020g02530.t01	unigene:Vvi.2774	RefSeq:XP_002279719
RefSeq:XP_002279719.2	SEG:seg	:	:	:	:

Description

Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:D7T6P9]

Coordinates

chr5:-:4205645..4215886

Molecular Weight (calculated)

63905.6 Da

IEP (calculated)

8.441

GRAVY (calculated)

-0.465

Length

563 amino acids

Sequence
(BLAST)

001: MQPDQRRKAS VEVDFFTEYG EGSRYRIEEV IGKGSYGVVC SAYDTHCGEK VAIKKINDIF EHVSDATRIL REIKLLRLLR HPDIVEIKHI LLPPSSREFK
101: DIYVVFELME SDLHQVIKAN DDLTPEHYQF FLYQLLRGLK YIHTANVFHR DLKPKNILAN ADCKLKICDF GLARVAFNDT PTAIFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDIWSIGCI FAELLTGKPL FPGKNVVHQL DLMTDLLGTP SAEAIARVRN EKARRYLSSM RKKKPIPLSQ KFPNADPLAL RLLERMLAFE
301: PKDRPSAEEA LADPYFKGLA KVEREPSAQP VTKLEFEFER RRITKEDVRD LIYREILEYH PKMLKEYLEG TEPTSFMYPS AVDQFKKQFA YLEEHYGNGA
401: TVAPPERQHA SLPRPCVLYS DNSLHNSAEV ADDLSKCCIK EVEKPHMDRS CGIPMARLPL QVPQSTQGGA ARPGKVVGSV LRYNNCGAAA AAEVLEQRRM
501: VRNPPVASQY NASSCSYPRR NSSCKNERGD NEGVEGSNGL QPKPQYMARK VAAAQGGSGS HWY

Best Arabidopsis Sequence Match ( AT5G19010.1 )
(BLAST)

001: MQPDHRKKSS VEVDFFTEYG EGSRYRIEEV IGKGSYGVVC SAYDTHTGEK VAIKKINDIF EHVSDATRIL REIKLLRLLR HPDIVEIKHI LLPPSRREFR
101: DIYVVFELME SDLHQVIKAN DDLTPEHYQF FLYQLLRGLK YIHTANVFHR DLKPKNILAN ADCKLKICDF GLARVAFNDT PTAIFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDIWSIGCI FAELLTGKPL FPGKNVVHQL DLMTDMLGTP SAEAIGRVRN EKARRYLSSM RKKKPIPFSH KFPHTDPLAL RLLEKMLSFE
301: PKDRPTAEEA LADVYFKGLA KVEREPSAQP VTKLEFEFER RRITKEDVRE LIYRESLEYH PKMLKEYLDG SEPTNFMYPS AVEHFKKQFA YLEEHYKNGT
401: SHNPPERQQH ASLPRACVLY SDNNHPVAQQ SSAEVTDGLS KCSIRDERPR GADRNAQMPM SRIPINVPQT IQGAAVARPG KVVGSVLRYN NCGAATGVEA
501: LEQQQRRMVR NPAAASQYPK RTQPCKSNRG DEDCATAAEG PSRLKPNTQY IPQKVSAAQD TAMSRWY

Arabidopsis Description

MPK16Mitogen-activated protein kinase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4J2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.