CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91959
KRH04403
KRH34817

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19010.1	KRG91959	AT3G54850.1	21798944
AT5G19010.1	KRH04403	AT3G54850.1	21798944
AT5G19010.1	KRH34817	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20928	Soybean	cytosol	67.03	43.34
KRH11360	Soybean	cytosol	65.66	42.6
VIT_05s0020g02530.t01	Wine grape	cytosol	65.38	42.27
KRH02140	Soybean	cytosol	59.34	40.91
Solyc01g080240.2.1	Tomato	cytosol	63.46	40.88
PGSC0003DMT400011138	Potato	cytosol	63.19	40.71
Bra002201.1-P	Field mustard	cytosol	52.47	37.97
CDY13942	Canola	cytosol	57.42	37.32
CDX92566	Canola	cytosol	57.42	37.25
AT5G19010.1	Thale cress	cytosol	57.69	37.04
CDY66706	Canola	cytosol	56.59	36.85
Bra006490.1-P	Field mustard	cytosol	56.32	36.74
Os11t0271100-01	Rice	cytosol, plasma membrane	50.0	36.55
CDX70861	Canola	cytosol	56.04	36.49
Os05t0143500-02	Rice	cytosol	54.12	36.35
Zm00001d006790_P006	Maize	cytosol	53.3	35.66
KXG21277	Sorghum	cytosol	54.12	35.43
HORVU1Hr1G018740.1	Barley	cytosol	53.3	35.34
TraesCS1A01G086500.1	Wheat	cytosol	53.02	35.15
TraesCS1D01G088000.2	Wheat	cytosol	53.02	34.9
Zm00001d024807_P008	Maize	cytosol	53.3	34.83
KXG28281	Sorghum	cytosol	51.65	34.81
TraesCS1B01G104900.1	Wheat	cytosol	52.2	34.61
KRH21856	Soybean	cytosol	38.19	30.22
KRH46057	Soybean	cytosol	47.25	27.97
KRH39091	Soybean	cytosol	39.29	27.88
KRG98916	Soybean	cytosol	46.7	27.69
KRH14477	Soybean	cytosol	44.78	26.68
KRH73659	Soybean	cytosol	45.05	26.07
KRH13458	Soybean	cytosol	43.41	26.03
KRH41801	Soybean	cytosol, mitochondrion	41.48	25.64
KRH60506	Soybean	cytosol	41.76	25.59
KRH48627	Soybean	cytosol	39.29	24.07
KRH27898	Soybean	cytosol	13.19	17.2
KRG89065	Soybean	nucleus	14.56	14.29
KRH24954	Soybean	nucleus	14.56	14.29
KRH77584	Soybean	cytosol	13.46	13.07
KRH71277	Soybean	nucleus	14.01	13.04
KRH48074	Soybean	cytosol, nucleus	13.19	12.87
KRH06592	Soybean	cytosol	13.19	12.87
KRH40392	Soybean	cytosol	13.19	12.87
KRH00834	Soybean	cytosol	12.91	12.6
KRH41233	Soybean	cytosol	13.19	12.5
KRH59962	Soybean	cytosol	13.19	12.47
KRH58939	Soybean	cytosol	12.36	12.23
KRG88717	Soybean	cytosol	12.36	12.06
KRH24967	Soybean	cytosol	12.36	11.97
KRH61130	Soybean	cytosol	12.09	11.86
KRH50176	Soybean	cytosol, nucleus	13.74	11.55
KRH51805	Soybean	cytosol	11.54	11.32
KRH42844	Soybean	cytosol	12.09	11.03
KRH50997	Soybean	cytosol	1.65	2.9

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A0R0J8F3	EMBL:ACUP02004721	EnsemblPlantsGene:GLYMA_07G2554002
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH50993	ProteinID:KRH50993	ProteinID:KRH50993.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF211	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	UniParc:UPI0006ED5E0C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:43173672..43176458

Molecular Weight (calculated)

40758.0 Da

IEP (calculated)

8.935

GRAVY (calculated)

-0.525

Length

364 amino acids

Sequence
(BLAST)

001: YTPAIDIWSI GCIFAELLTG KPLFPGKNVV HQLDLMTDFL GTPSPEAIAR VRNEKARRYL CCMRKKKPVP FSQKFPNVDP LALRVLERML AFEPKDRPTA
101: EEALAYPYFK GLAKVEREPS AQPVTKMEFE FERRRITKED VRELIYREIL EYHPKMLKEH LEGEEPTGFM YPSAVDHFKK QFAYLEEHYG KAGTVTPPER
201: QHASLPRPCV LYSDNSRQNM AEVADDISKC IIKEVEKPAM DRTGGIPMTR LPLQAPQNIQ GVMTDRIASG VAARPGKVVG SILHYNNCGA AVTADAEQRR
301: MGRNPSVSAQ YAAPSSSYPR RNPSCKSERA EEVIEGANGL QTKPQHITQK VAAAALGGPG GNWY

Best Arabidopsis Sequence Match ( AT2G42880.1 )
(BLAST)

001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY

Arabidopsis Description

MPK20Mitogen-activated protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.