Factsheet for TraesCS1D01G088000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G498700.1
TraesCS7A01G001900.1
TraesCS7D01G001600.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19010.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT5G19010.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT5G19010.1	TraesCS7D01G001600.2	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G104900.1	Wheat	cytosol	98.19	98.91
TraesCS1A01G086500.1	Wheat	cytosol	98.01	98.72
HORVU1Hr1G018740.1	Barley	cytosol	98.01	98.72
KRH50997	Soybean	cytosol	34.0	90.82
Os05t0143500-02	Rice	cytosol	87.7	89.48
Zm00001d006790_P006	Maize	cytosol	83.73	85.11
KXG21277	Sorghum	cytosol	84.45	83.99
Zm00001d024807_P008	Maize	cytosol	83.73	83.12
VIT_05s0020g02530.t01	Wine grape	cytosol	75.59	74.25
KRH11360	Soybean	cytosol	75.05	73.97
KRH20928	Soybean	cytosol	75.23	73.89
Solyc01g080240.2.1	Tomato	cytosol	75.41	73.81
PGSC0003DMT400011138	Potato	cytosol	75.23	73.63
Bra002201.1-P	Field mustard	cytosol	66.91	73.56
KRH02140	Soybean	cytosol	69.44	72.73
TraesCS7D01G342800.3	Wheat	cytosol	55.15	72.45
CDY13942	Canola	cytosol	73.06	72.14
CDX92566	Canola	cytosol	73.06	72.01
Bra006490.1-P	Field mustard	cytosol	72.33	71.68
CDY66706	Canola	cytosol	72.33	71.56
CDX70861	Canola	cytosol	72.15	71.38
AT5G19010.1	Thale cress	cytosol	73.06	71.25
TraesCS3D01G221700.1	Wheat	cytosol	56.78	64.34
TraesCS6D01G082900.2	Wheat	peroxisome	52.98	58.02
TraesCS3D01G242200.2	Wheat	cytosol	61.12	57.88
TraesCS1D01G410100.1	Wheat	cytosol	58.05	57.84
TraesCS7D01G403700.1	Wheat	cytosol	60.76	57.83
TraesCS3D01G225600.1	Wheat	cytosol	63.11	56.93
TraesCS1D01G428900.1	Wheat	cytosol	60.04	55.43
KRH50993	Soybean	cytosol	34.9	53.02
TraesCS1D01G422800.1	Wheat	mitochondrion	57.32	52.4
TraesCS4D01G198600.1	Wheat	cytosol	29.84	44.72
TraesCS7D01G414700.1	Wheat	cytosol	29.48	44.17
TraesCS7D01G106400.1	Wheat	cytosol	30.92	43.51
TraesCS1D01G192200.1	Wheat	cytosol	29.48	43.35
TraesCS6D01G108100.1	Wheat	cytosol	29.48	42.67
TraesCS7D01G414900.1	Wheat	cytosol	28.93	42.44
TraesCS7D01G295900.1	Wheat	cytosol	28.93	41.34
TraesCS5D01G303300.1	Wheat	cytosol	21.16	39.39

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:MAP_kinase_CS	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS01351	PFscan:PS50011
PANTHER:PTHR24055	PANTHER:PTHR24055:SF211	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
EnsemblPlantsGene:TraesCS1D01G088000	EnsemblPlants:TraesCS1D01G088000.2	TIGR:cd07859	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:73675476..73679575

Molecular Weight (calculated)

62757.9 Da

IEP (calculated)

8.899

GRAVY (calculated)

-0.513

Length

553 amino acids

Sequence
(BLAST)

001: MDFFTEYGEG NRYKIEEVIG KGSYGVVCSA LDTHTGEKVA IKKINDIFEH VSDATRILRE IKLLRLLRHP DIVEIKHILL PPSRREFKDI YVVFELMESD
101: LHQVIKANDD LTPEHYQFFL YQLLRGLKYI HTANVFHRDL KPKNILANAD CKLKICDFGL ARVAISDTPT AIFWTDYIAT RWYRAPELCG SFFSKYTPAI
201: DIWSIGCIFA ELLTGKPLFP GKNVVHQLDI ITDLLGTPAP ETIARIRNEK ARRYLSSMRR KKPVPFTQKF PNADPLALNL LERMLAFDPK DRPSAEEALA
301: DLYFKNIASV DREPSAQPIT KLEFEFERRR ITKDDIRELI YREILEYHPN MLREFLEGAE PTNFMYPSAV DHFKKQFTFL EEHYAKGSTA APPERQHNSL
401: PRPSVIYSDN RPQGSDSRPQ GAANITDDLS RCIIRDNTQK PRRDPASVGA NRVPQGKHLG AAVARPGKVV GSALRYGNCS TPGTEQYEQR RVITSQGVVP
501: NGVPSGSSYP RRNNTCKSET GEAERIDVSQ AGPPKPYTGN KLPATVDGRN GHW

Best Arabidopsis Sequence Match ( AT5G19010.1 )
(BLAST)

001: MQPDHRKKSS VEVDFFTEYG EGSRYRIEEV IGKGSYGVVC SAYDTHTGEK VAIKKINDIF EHVSDATRIL REIKLLRLLR HPDIVEIKHI LLPPSRREFR
101: DIYVVFELME SDLHQVIKAN DDLTPEHYQF FLYQLLRGLK YIHTANVFHR DLKPKNILAN ADCKLKICDF GLARVAFNDT PTAIFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDIWSIGCI FAELLTGKPL FPGKNVVHQL DLMTDMLGTP SAEAIGRVRN EKARRYLSSM RKKKPIPFSH KFPHTDPLAL RLLEKMLSFE
301: PKDRPTAEEA LADVYFKGLA KVEREPSAQP VTKLEFEFER RRITKEDVRE LIYRESLEYH PKMLKEYLDG SEPTNFMYPS AVEHFKKQFA YLEEHYKNGT
401: SHNPPERQQH ASLPRACVLY SDNNHPVAQQ SSAEVTDGLS KCSIRDERPR GADRNAQMPM SRIPINVPQT IQGAAVARPG KVVGSVLRYN NCGAATGVEA
501: LEQQQRRMVR NPAAASQYPK RTQPCKSNRG DEDCATAAEG PSRLKPNTQY IPQKVSAAQD TAMSRWY

Arabidopsis Description

MPK16Mitogen-activated protein kinase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4J2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.