Factsheet for VIT_06s0004g03620.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88717	Soybean	cytosol	83.56	83.11
Solyc11g072630.1.1	Tomato	cytosol	83.02	82.8
KRH24967	Soybean	cytosol	83.83	82.71
PGSC0003DMT400065261	Potato	cytosol	82.21	81.99
CDY22716	Canola	cytosol	80.32	80.32
AT1G07880.2	Thale cress	cytosol	78.44	80.17
Bra031597.1-P	Field mustard	cytosol	79.78	79.78
CDY06283	Canola	cytosol	79.78	79.78
VIT_02s0025g00270.t01	Wine grape	cytosol	79.78	78.93
VIT_15s0046g02010.t01	Wine grape	cytosol	78.44	77.6
VIT_06s0004g03540.t01	Wine grape	cytosol	65.5	64.8
VIT_05s0094g00900.t01	Wine grape	cytosol	69.0	64.32
VIT_18s0001g13010.t01	Wine grape	cytosol	57.95	57.18
VIT_04s0023g02420.t01	Wine grape	cytosol, nucleus, peroxisome	54.18	54.62
VIT_05s0020g02530.t01	Wine grape	cytosol	45.55	30.02
VIT_19s0014g00220.t01	Wine grape	cytosol	47.44	29.43
VIT_17s0000g02570.t01	Wine grape	mitochondrion	46.9	28.95
VIT_12s0142g00130.t01	Wine grape	cytosol	46.09	28.03
VIT_01s0011g04920.t01	Wine grape	cytosol	45.55	27.57

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	EntrezGene:100251947	wikigene:100251947	MapMan:13.4.4.1.4	MapMan:18.4.3.6
Gene3D:3.30.200.20	ProteinID:CBI16237	ProteinID:CBI16237.3	UniProt:D7SKQ9	EMBL:FN594951	GO:GO:0000165
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010468	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100251947	wikigene:LOC100251947
InterPro:MAP_kinase_CS	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS01351
PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF185	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC61436	UniParc:UPI00015C7B23	ArrayExpress:VIT_06s0004g03620	EnsemblPlantsGene:VIT_06s0004g03620
EnsemblPlants:VIT_06s0004g03620.t01	unigene:Vvi.14750	RefSeq:XP_002284710	RefSeq:XP_002284710.1	:	:

Description

Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:D7SKQ9]

Coordinates

chr6:+:4580727..4584943

Molecular Weight (calculated)

42535.1 Da

IEP (calculated)

4.686

GRAVY (calculated)

-0.223

Length

371 amino acids

Sequence
(BLAST)

001: MENESAAVEV KGVPSYGGKY VQYNVLGNLF EVSAKYVPPI QPVGRGAYGI VCCATNSETN KEVAIKKIGN AFDNRIDAKR TLREIKLLCH MDHENIVKIK
101: DIIRPPDKEK FNDVYIVYEL MDTDLHQIIR SSQALTDDHC QYFLYQLLRG LKYIHSANVL HRDLKPSNLL LNADCDLKIC DFGLARTTSE TDFMTEYVVT
201: RWYRAPELLL NCSEYTAAID IWSVGCILME ILRREPLFPG KDYVQQLVLI TELLGSPEDS DLGFLRSDNA RKYVKQLPCV PKQPFSEKFP NISPIAMDLV
301: EKMLVFDPSK RITVEEALNH PFLLPLHEIN EEPICPSPFI FDFEQSSLSE DDIKELIWNE SLNFNPDEML E

Best Arabidopsis Sequence Match ( AT1G07880.2 )
(BLAST)

001: MEKREDGGIL TYDGRYVMYN VLGNIFELSS KYIPPIEPIG RGAYGIVCCA TNSETNEEVA IKKIANAFDN RVDAKRTLRE IKLLSHMDHD NVIKIKDIIE
101: LPEKERFEDV YIVYELMDTD LHQIIRSTQT LTDDHCQYFL YQILRGLKYI HSANVLHRDL KPSNLVLNTN CDLKICDFGL ARTSNETEIM TEYVVTRWYR
201: APELLLNSSE YTGAIDIWSV GCIFMEILRR ETLFPGKDYV QQLKLITELL GSPDDSDLDF LRSDNARKYV KQLPHVQKQS FREKFPNISP MALDLAEKML
301: VFDPSKRITV DEALKQPYLA SLHEINEEPT CPTPFSFDFE ETALDEQDIK ELVWRESLHF KNM

Arabidopsis Description

MPK13Mitogen-activated protein kinase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.