Factsheet for VIT_06s0004g03540.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0527g00020.t01	nucleus
VIT_01s0011g06360.t01
VIT_01s0026g02200.t01
VIT_01s0244g00140.t01
VIT_02s0012g01280.t01
VIT_05s0049g00140.t01
VIT_09s0018g01820.t01
VIT_11s0052g01840.t01
VIT_12s0057g00710.t01
VIT_14s0068g01200.t01
VIT_16s0013g00900.t01
VIT_16s0013g00950.t01
VIT_16s0013g00970.t01
VIT_16s0013g00980.t01
VIT_16s0013g00990.t01
VIT_16s0013g01000.t01
VIT_16s0013g01030.t01
VIT_16s0013g01050.t01
VIT_16s0013g01060.t01
VIT_16s0013g01070.t01
VIT_16s0013g01090.t01
VIT_16s0013g01110.t01
VIT_16s0013g01120.t01
VIT_17s0000g10280.t01
VIT_18s0001g06350.t01
VIT_18s0076g00330.t01
VIT_19s0014g02490.t01	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G45640.1	VIT_05s0049g00140.t01	AT1G04330.1	21798944
AT3G45640.1	VIT_14s0068g01200.t01	AT1G12860.1	21798944
AT3G45640.1	VIT_01s0011g06360.t01	AT1G14687.1	21798944
AT3G45640.1	VIT_00s0527g00020.t01	AT1G28280.1	24750137
AT3G45640.1	VIT_00s0527g00020.t01	AT1G28280.1	24750137
AT3G45640.1	VIT_18s0076g00330.t01	AT1G43700.1	23115249
AT3G45640.1	VIT_09s0018g01820.t01	AT1G51660.1	19513235
AT3G45640.1	VIT_09s0018g01820.t01	AT1G51660.1	23115249
AT3G45640.1	VIT_01s0026g02200.t01	AT1G69690.1	21798944
AT3G45640.1	VIT_18s0001g06350.t01	AT1G78310.1	21798944
AT3G45640.1	VIT_12s0057g00710.t01	AT2G05230.1	21798944
AT3G45640.1	VIT_12s0057g00710.t01	AT2G05250.1	21798944
AT3G45640.1	VIT_11s0052g01840.t01	AT2G18730.1	21798944
AT3G45640.1	VIT_02s0012g01280.t01	AT2G35230.1	24750137
AT3G45640.1	VIT_19s0014g02490.t01	AT3G15300.1	24750137
AT3G45640.1	VIT_16s0013g00900.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g00950.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g00970.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g00980.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g00990.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01000.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01030.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01050.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01060.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01070.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01090.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01110.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_16s0013g01120.t01	AT4G17490.1	23300166
AT3G45640.1	VIT_01s0244g00140.t01	AT5G13280.1	21798944
AT3G45640.1	VIT_19s0014g02490.t01	AT5G53830.1	24750137
AT3G45640.1	VIT_17s0000g10280.t01	AT5G63310.1	12506203
AT3G45640.1	VIT_17s0000g10280.t01	AT5G63310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038281.1-P	Field mustard	cytosol	76.53	86.19
CDX99153	Canola	cytosol	76.53	86.19
KRH24954	Soybean	nucleus	83.47	84.37
KRG89065	Soybean	nucleus	83.2	84.1
CDX86029	Canola	cytosol	82.93	84.05
PGSC0003DMT400077272	Potato	cytosol	83.47	83.91
Solyc06g005170.2.1	Tomato	cytosol	82.93	83.38
AT3G45640.1	Thale cress	cytosol	81.33	82.43
GSMUA_Achr6P33100_001	Banana	cytosol	79.2	80.93
GSMUA_Achr9P04280_001	Banana	cytosol	77.87	79.13
KXG39626	Sorghum	cytosol	75.2	75.4
TraesCS4B01G197800.1	Wheat	cytosol, nucleus	73.87	75.07
TraesCS4D01G198600.1	Wheat	cytosol	73.87	75.07
TraesCS4A01G106400.1	Wheat	cytosol	73.87	75.07
HORVU4Hr1G057200.4	Barley	cytosol	73.87	75.07
Zm00001d047758_P003	Maize	cytosol	74.67	74.87
Os03t0285800-01	Rice	cytosol	73.33	74.53
Zm00001d028711_P003	Maize	cytosol	73.33	73.14
VIT_05s0094g00900.t01	Wine grape	cytosol	74.93	70.6
VIT_02s0025g00270.t01	Wine grape	cytosol	66.67	66.67
VIT_15s0046g02010.t01	Wine grape	cytosol	65.87	65.87
VIT_06s0004g03620.t01	Wine grape	cytosol	64.8	65.5
VIT_18s0001g13010.t01	Wine grape	cytosol	54.93	54.79
VIT_04s0023g02420.t01	Wine grape	cytosol, nucleus, peroxisome	52.8	53.8
VIT_05s0020g02530.t01	Wine grape	cytosol	47.2	31.44
VIT_17s0000g02570.t01	Wine grape	mitochondrion	47.2	29.45
VIT_19s0014g00220.t01	Wine grape	cytosol	45.87	28.76
VIT_12s0142g00130.t01	Wine grape	cytosol	45.6	28.03
VIT_01s0011g04920.t01	Wine grape	cytosol	45.6	27.9

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	EntrezGene:100263976	wikigene:100263976	MapMan:13.4.4.1.4	MapMan:18.4.3.6
Gene3D:3.30.200.20	ProteinID:CCB43631	ProteinID:CCB43631.1	UniProt:F6GTW7	EMBL:FN594951	GO:GO:0000165
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009414	GO:GO:0009605
GO:GO:0009607	GO:GO:0009628	GO:GO:0009987	GO:GO:0010468	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0042742	GO:GO:0050832	GO:GO:1901002	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100263976	wikigene:LOC100263976	InterPro:MAP_kinase_CS	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF214
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC56256
TIGR:TC66292	UniParc:UPI00015C7BFF	ArrayExpress:VIT_06s0004g03540	EnsemblPlantsGene:VIT_06s0004g03540	EnsemblPlants:VIT_06s0004g03540.t01	unigene:Vvi.24277
unigene:Vvi.6882	unigene:Vvi.9763	RefSeq:XP_002284807	RefSeq:XP_002284807.1	:	:

Description

Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:F6GTW7]

Coordinates

chr6:-:4432888..4436315

Molecular Weight (calculated)

43112.9 Da

IEP (calculated)

5.953

GRAVY (calculated)

-0.249

Length

375 amino acids

Sequence
(BLAST)

001: MADNTRNSTG GQLSDFPAVP THGGLFFQHN IFGNLFEITA KYRPPIMPIG RGAYGIVCSV LNSETNEMVA IKKIANAFDN HMDAKRTLRE IKLLRHLDHE
101: NVIGIRDVVP PPLRREFSDV YIATELMDTD LHQIIRSNQG LSEEHCQYFL YQILRGLKYI HSANVIHRDL KPSNLLLNAN CDLKICDFGL ARPTAENEFM
201: TEYVVTRWYR APELLLNSSD YTAAIDVWSV GCIFMELMNR RPLFAGKDHV HQMRLLTELL GTPTESDLGF VRNDDARRYI MQLPQHPRQP LVNVFPHIHP
301: LAIDLIDRML TFDPTKRITV EEALAHPYLS RLHDTADEPV CPEPFSFEFE QQALVEEQMK DMIYQEALFF NPGYA

Best Arabidopsis Sequence Match ( AT3G45640.1 )
(BLAST)

001: MNTGGGQYTD FPAVETHGGQ FISYDIFGSL FEITSKYRPP IIPIGRGAYG IVCSVLDTET NELVAMKKIA NAFDNHMDAK RTLREIKLLR HLDHENIIAI
101: RDVVPPPLRR QFSDVYISTE LMDTDLHQII RSNQSLSEEH CQYFLYQLLR GLKYIHSANI IHRDLKPSNL LLNANCDLKI CDFGLARPTS ENDFMTEYVV
201: TRWYRAPELL LNSSDYTAAI DVWSVGCIFM ELMNRKPLFP GKDHVHQMRL LTELLGTPTE SDLGFTHNED AKRYIRQLPN FPRQPLAKLF SHVNPMAIDL
301: VDRMLTFDPN RRITVEQALN HQYLAKLHDP NDEPICQKPF SFEFEQQPLD EEQIKEMIYQ EAIALNPTYG

Arabidopsis Description

MPK3Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:Q0WVS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.