Factsheet for VIT_11s0052g01840.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0094g00900.t01
VIT_13s0139g00390.t01
VIT_13s0139g00410.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18730.1	VIT_05s0094g00900.t01	AT2G43790.1	21798944
AT2G18730.1	VIT_13s0139g00390.t01	AT4G36690.1	21798944
AT2G18730.1	VIT_13s0139g00410.t01	AT4G36690.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018811	Potato	cytosol	31.05	79.9
GSMUA_Achr1P23380_001	Banana	cytosol	32.81	78.14
GSMUA_Achr10P...	Banana	cytosol	18.75	75.59
KRH02925	Soybean	cytosol	68.95	73.54
KRH54995	Soybean	cytosol, plastid	68.36	72.92
KRH18970	Soybean	cytosol	68.16	72.71
KRH62935	Soybean	cytosol	68.55	72.37
Bra038816.1-P	Field mustard	cytosol	65.62	69.71
CDY13009	Canola	cytosol	65.62	69.71
Solyc06g009270.2.1	Tomato	nucleus	65.43	69.65
CDY49312	Canola	cytosol	65.43	69.5
CDY51490	Canola	cytosol	64.45	68.89
Bra006807.1-P	Field mustard	plastid	64.84	68.88
CDX88634	Canola	plastid	64.84	68.88
AT2G18730.1	Thale cress	cytosol	65.43	68.65
AT5G57690.1	Thale cress	cytosol, plastid	65.23	68.58
Solyc07g006580.2.1	Tomato	cytosol	64.84	68.31
CDY30304	Canola	cytosol	63.67	68.06
Bra038549.1-P	Field mustard	cytosol	63.67	68.06
AT4G30340.1	Thale cress	cytosol	65.04	67.68
CDY28179	Canola	cytosol	64.45	67.21
Bra011184.1-P	Field mustard	cytosol	64.45	67.21
CDY68130	Canola	plastid	58.98	67.11
CDX68647	Canola	cytosol	63.67	66.53
HORVU6Hr1G083620.21	Barley	mitochondrion	50.2	66.24
GSMUA_Achr7P16340_001	Banana	cytosol	60.16	64.17
Os02t0787800-01	Rice	plasma membrane	59.77	62.7
Zm00001d018333_P001	Maize	plasma membrane	60.16	62.6
EES07651	Sorghum	plastid	60.16	62.6
GSMUA_Achr10P...	Banana	cytosol	46.68	61.92
TraesCS6B01G381300.2	Wheat	cytosol	58.98	60.16
TraesCS6A01G347800.3	Wheat	cytosol, plastid	58.2	60.08
TraesCS6D01G330800.1	Wheat	cytosol	58.59	59.52
HORVU7Hr1G068230.1	Barley	plastid	60.55	58.94
TraesCS7D01G291600.1	Wheat	mitochondrion, plastid	59.57	57.98
TraesCS7A01G297200.1	Wheat	plastid	59.38	57.79
TraesCS7B01G198600.1	Wheat	plastid	58.59	57.03
KXG24829	Sorghum	plastid	58.01	57.01
TraesCS6B01G428500.1	Wheat	plastid	58.01	56.36
GSMUA_Achr6P03930_001	Banana	cytosol	13.87	54.62
Zm00001d024192_P001	Maize	mitochondrion, plastid	46.88	51.61
GSMUA_Achr1P23370_001	Banana	mitochondrion	26.95	49.29
GSMUA_Achr6P03940_001	Banana	cytosol	21.68	48.05
VIT_12s0057g00010.t01	Wine grape	cytosol	29.49	30.2
VIT_19s0014g03790.t01	Wine grape	cytosol	28.12	30.06
VIT_12s0055g01300.t01	Wine grape	cytosol	8.59	29.73
VIT_12s0178g00060.t01	Wine grape	extracellular	5.08	28.57
VIT_12s0178g00140.t01	Wine grape	cytosol	12.3	27.88
VIT_12s0178g00170.t01	Wine grape	cytosol	11.33	27.75
VIT_12s0055g01170.t01	Wine grape	cytosol	10.94	27.59
VIT_03s0017g00770.t01	Wine grape	extracellular	4.88	26.88
VIT_12s0121g00390.t01	Wine grape	cytosol	6.45	26.4
VIT_12s0178g00090.t01	Wine grape	nucleus	7.62	22.54
VIT_15s0107g00350.t01	Wine grape	cytosol	6.64	19.21
VIT_07s0031g02840.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	23.24	16.67
VIT_17s0000g06970.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	21.09	14.77

Protein Annotations

KEGG:00561+2.7.1.107	KEGG:00564+2.7.1.107	KEGG:04070+2.7.1.107	EntrezGene:100241035	wikigene:100241035	Gene3D:2.60.200.40
Gene3D:3.40.50.10330	MapMan:5.2.1.4	InterPro:ATP-NAD_kinase_N	ProteinID:CCB44589	ProteinID:CCB44589.1	InterPro:DGK
InterPro:Diacylglycerol_kin_accessory	InterPro:Diacylglycerol_kinase_cat_dom	InterPro:Diacylglycerol_kinase_pln	UniProt:F6GXA3	EMBL:FN594964	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003951	GO:GO:0004143	GO:GO:0005488	GO:GO:0005524
GO:GO:0007154	GO:GO:0007165	GO:GO:0007205	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR001206	InterPro:IPR017438	EntrezGene:LOC100241035
wikigene:LOC100241035	InterPro:NAD/diacylglycerol_kinase_sf	PFAM:PF00609	PFAM:PF00781	PIRSF:PIRSF030829	PFscan:PS50146
PANTHER:PTHR11255	PANTHER:PTHR11255:SF56	SMART:SM00045	SMART:SM00046	SUPFAM:SSF111331	TIGR:TC52903
UniParc:UPI000210837B	ArrayExpress:VIT_11s0052g01840	EnsemblPlantsGene:VIT_11s0052g01840	EnsemblPlants:VIT_11s0052g01840.t01	RefSeq:XP_002271984	RefSeq:XP_002271984.2
RefSeq:XP_002271984.3	SEG:seg	:	:	:	:

Description

Diacylglycerol kinase [Source:UniProtKB/TrEMBL;Acc:F6GXA3]

Coordinates

chr11:+:19725539..19781265

Molecular Weight (calculated)

56848.9 Da

IEP (calculated)

7.045

GRAVY (calculated)

-0.306

Length

512 amino acids

Sequence
(BLAST)

001: MKNNSDNIIF KFQSSVASSN TLPFSDSASS ANFDSMDSPS SVGDSIRVAA RSSVIDSFRG CGLSGIRIDK EELKRVILLP QYLRLAMRDS INSKDPNAGD
101: HHLEGAENAE SPECPIIVFI NSRSGGRHGP ELKERLQELM SREQVFDLSA VKPHEFIQYG LGCLEKLAKQ GDQCAKEVRE KMRIVVAGGD GTVGWVLGSL
201: GELDKQNREP VPPVGIIPLG TGNDLSRSFG WGGSFPFAWK SAVKRSLHRA TKGPICRLDS WHVLISMPPG VIVDPPHSLK PTEECALDQG LDVESQLPEQ
301: VTCYEGVFYN YFSIGMDAQV AYGFHHLRNE RPYLAQGPIS NKIIYSGYSC TQGWFFTPCM SDPSLRGLKN ILKIHIKKVN CSEWEQIRVP SSVRAIVALN
401: LHSYGSGRHP WGNLKPDYLE KKGFVEAHVD DGLLEIFGLK QGWHASFVMV ELISAKHIAQ AAAIRLEIRG GEWKQAYMQM DGEPWKQPIN NEFSTFVEIK
501: RVPFQSPMIS GE

Best Arabidopsis Sequence Match ( AT2G18730.1 )
(BLAST)

001: MDSPVSKTDA SKEKFVASRP STADSKTMRG CGLANLAWVG VDKVELRQRL MMPEYLRLAM RDCIKRKDSS AIPDHLLLPG GAVADMAPHA PMVVFINPNS
101: GGRHGPVLKE RLQQLMSEEQ VFDLTEVKPH EFVRYGLGCL EKVAAEGDEC AKECRARLRI MVAGGDGTVG WVLGCLGELN KDGKSQIPPV GVIPLGTGND
201: LSRSFGWGGS FPFAWRSAVK RTLHRASMGP VARLDSWKIL VSMPSGEVVD PPYSLKPAEE NELDQGLDAG IDAPPLAKAY EGVFYNYLSI GMDAQVAYGF
301: HHLRNTKPYL AQGPISNKII YSSFGCSQGW FCTPCVNDPG LRGLRNIMKI HIKKVNCSQW EEIAVPKNVR SIVALNLHSY GSGSHPWGNL KPDYLEKRGF
401: VEAHCDDGLI EIFGFKQGWH ASFVMAELIS AKHIAQAAAV RFELRGGDWR DAFLQMDGEP WKQPMSTEYS TFVEIKKVPY QSLMINNE

Arabidopsis Description

DGK3Diacylglycerol kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZG1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.