Factsheet for VIT_12s0178g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0121g00390.t01	Wine grape	cytosol	47.98	66.4
VIT_12s0178g00170.t01	Wine grape	cytosol	79.19	65.55
VIT_12s0178g00140.t01	Wine grape	cytosol	79.19	60.62
VIT_12s0055g01300.t01	Wine grape	cytosol	49.71	58.11
VIT_12s0055g01170.t01	Wine grape	cytosol	52.6	44.83
VIT_12s0178g00060.t01	Wine grape	extracellular	17.92	34.07
VIT_15s0107g00350.t01	Wine grape	cytosol	34.68	33.9
CDX97422	Canola	plastid	10.4	24.66
VIT_03s0017g00770.t01	Wine grape	extracellular	11.56	21.51
CDY14256	Canola	plastid	7.51	15.12
VIT_12s0057g00010.t01	Wine grape	cytosol	38.15	13.2
Solyc12g005380.1.1	Tomato	cytosol	36.42	12.68
VIT_19s0014g03790.t01	Wine grape	cytosol	34.1	12.32
PGSC0003DMT400048955	Potato	cytosol	30.64	11.21
VIT_11s0052g01840.t01	Wine grape	cytosol, plastid	22.54	7.62
VIT_17s0000g06970.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	13.87	3.28
VIT_07s0031g02840.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	12.72	3.08
GSMUA_Achr9P19440_001	Banana	cytosol	1.16	1.08

Protein Annotations

KEGG:00561+2.7.1.107	KEGG:00564+2.7.1.107	KEGG:04070+2.7.1.107	MapMan:35.1	ProteinID:CCB52778	ProteinID:CCB52778.1
InterPro:DGK	UniProt:F6HJM0	EMBL:FN595785	GO:GO:0003674	GO:GO:0003824	GO:GO:0004143
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	PANTHER:PTHR11255	PANTHER:PTHR11255:SF29	UniParc:UPI00021090DB	ArrayExpress:VIT_12s0178g00090
EnsemblPlantsGene:VIT_12s0178g00090	EnsemblPlants:VIT_12s0178g00090.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:-:8510518..8519719

Molecular Weight (calculated)

20042.1 Da

IEP (calculated)

10.024

GRAVY (calculated)

-0.642

Length

173 amino acids

Sequence
(BLAST)

001: MGCANLEGVV RNFRTSLEQL ASEGHIFLIS APNRTRNITL PIIVKIKDQQ HQWKKLKLPR RKKERNFTSS FVDNELLEII GFRDSCHEEK FLPLNGHGTR
101: LAQVHQIHFE LCKGIAKHSY MSFDGTKWKQ HTPIDDDNYM IEISYSSKTR MLATSTSKCK HKARSPTPIE YSQ

Best Arabidopsis Sequence Match ( AT4G28130.1 )
(BLAST)

001: MVQSETSMEK YKNLSDFLKK FFIPSYVLSP EDEPEAQISC TTAPENPILV FINSKSGGQL GAELILTYRT LLNDKQVFDL EVETPDKVLQ RIYLNLERLK
101: DDSLASKIRD KLKIIVAGGD GTAGWLLGVV SDLNLSNPPP IATVPLGTGN NLPFAFGWGK KNPGTDRSSV ESFLGKVINA KEMKIDNWKI LMRMKHPKEG
201: SCDITLKLPH SLPRIFPSDQ ENMEGYHTYR GGFWNYFSLG MDAQVSYAFH SQRKLHPERF KNQLVNQSTY LKLSCTQGWF FASLFHPSSQ NIAKLAKIQI
301: CDRNGQWNDL HIPQSIRSIV CLNLPSFSGG LNPWGTPNPK KQRDRSLTAP FVDDGLIEIV GFRNAWHGLI LLSPNGHGTR LAQANRVRLE FKKGAAKHAY
401: MRIDGEPWKQ PLPSNDETVM VEISHHGQVN MLATQNCRSK SMYESSSIIR FSNDEDDSSV VENEEF

Arabidopsis Description

DGK6Diacylglycerol kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4JKI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.