CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95394
KRH50176
KRH56450
KRH64800
KRH67075
KRH71277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18730.1	KRH50176	AT2G43790.1	21798944
AT2G18730.1	KRH71277	AT2G43790.1	21798944
AT2G18730.1	KRH56450	AT4G36690.1	21798944
AT2G18730.1	KRH64800	AT4G36690.1	21798944
AT2G18730.1	KRG95394	AT5G22355.1	21798944
AT2G18730.1	KRH67075	AT5G22355.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62935	Soybean	cytosol	92.29	91.34
PGSC0003DMT400018811	Potato	cytosol	32.29	77.89
KRH18970	Soybean	cytosol	76.88	76.88
KRH02925	Soybean	cytosol	76.04	76.04
GSMUA_Achr1P23380_001	Banana	cytosol	33.96	75.81
GSMUA_Achr10P...	Banana	cytosol	19.17	72.44
VIT_11s0052g01840.t01	Wine grape	cytosol, plastid	72.92	68.36
CDX88634	Canola	plastid	67.08	66.81
Bra006807.1-P	Field mustard	plastid	67.08	66.81
CDY51490	Canola	cytosol	65.42	65.55
Bra038816.1-P	Field mustard	cytosol	65.62	65.35
CDY13009	Canola	cytosol	65.42	65.15
CDY49312	Canola	cytosol	65.42	65.15
Bra038549.1-P	Field mustard	cytosol	65.0	65.14
CDY30304	Canola	cytosol	65.0	65.14
AT5G57690.1	Thale cress	cytosol, plastid	65.83	64.89
CDY28179	Canola	cytosol	66.25	64.77
Bra011184.1-P	Field mustard	cytosol	66.25	64.77
AT2G18730.1	Thale cress	cytosol	65.62	64.55
Solyc06g009270.2.1	Tomato	nucleus	64.38	64.24
AT4G30340.1	Thale cress	cytosol	65.83	64.23
CDY68130	Canola	plastid	60.21	64.22
Solyc07g006580.2.1	Tomato	cytosol	65.0	64.2
HORVU6Hr1G083620.21	Barley	mitochondrion	51.67	63.92
CDX68647	Canola	cytosol	64.79	63.47
EES07651	Sorghum	plastid	62.5	60.98
Os02t0787800-01	Rice	plasma membrane	61.25	60.25
Zm00001d018333_P001	Maize	plasma membrane	61.67	60.16
GSMUA_Achr7P16340_001	Banana	cytosol	58.75	58.75
TraesCS6A01G347800.3	Wheat	cytosol, plastid	60.42	58.47
TraesCS6B01G381300.2	Wheat	cytosol	60.83	58.17
TraesCS6D01G330800.1	Wheat	cytosol	60.83	57.94
HORVU7Hr1G068230.1	Barley	plastid	61.67	56.27
GSMUA_Achr10P...	Banana	cytosol	44.79	55.7
TraesCS7D01G291600.1	Wheat	mitochondrion, plastid	60.83	55.51
TraesCS7A01G297200.1	Wheat	plastid	60.42	55.13
TraesCS6B01G428500.1	Wheat	plastid	60.42	55.03
KXG24829	Sorghum	plastid	59.58	54.89
TraesCS7B01G198600.1	Wheat	plastid	59.38	54.18
GSMUA_Achr6P03930_001	Banana	cytosol	14.17	52.31
Zm00001d024192_P001	Maize	mitochondrion, plastid	47.71	49.25
GSMUA_Achr1P23370_001	Banana	mitochondrion	26.88	46.07
GSMUA_Achr6P03940_001	Banana	cytosol	20.62	42.86
KRH55430	Soybean	cytosol	11.04	36.05
KRH26885	Soybean	cytosol	30.42	29.92
KRH56049	Soybean	cytosol	29.17	28.93
KRH22465	Soybean	mitochondrion	22.29	27.16
KRH26024	Soybean	mitochondrion	28.33	26.93
KRH55429	Soybean	cytosol	17.08	24.4
KRH25479	Soybean	mitochondrion	10.62	21.52
KRH59643	Soybean	endoplasmic reticulum	22.5	15.34
KRH56845	Soybean	cytosol, endoplasmic reticulum, plastid	22.08	14.58
KRH03111	Soybean	cytosol, endoplasmic reticulum, plastid	22.08	14.58
KRH40992	Soybean	cytosol, extracellular, plastid	0.21	0.49

Protein Annotations

KEGG:00561+2.7.1.107	KEGG:00564+2.7.1.107	KEGG:04070+2.7.1.107	EntrezGene:100811505	Gene3D:2.60.200.40	Gene3D:3.40.50.10330
MapMan:5.2.1.4	EMBL:ACUP02003675	InterPro:ATP-NAD_kinase_N	InterPro:DGK	InterPro:Diacylglycerol_kin_accessory	InterPro:Diacylglycerol_kinase_cat_dom
InterPro:Diacylglycerol_kinase_pln	EnsemblPlantsGene:GLYMA_06G223900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003951
GO:GO:0004143	GO:GO:0005488	GO:GO:0005524	GO:GO:0007154	GO:GO:0007165	GO:GO:0007205
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR001206	InterPro:IPR017438	UniProt:K7KWM3	EnsemblPlants:KRH54995	ProteinID:KRH54995	ProteinID:KRH54995.1
InterPro:NAD/diacylglycerol_kinase_sf	PFAM:PF00609	PFAM:PF00781	PIRSF:PIRSF030829	PFscan:PS50146	PANTHER:PTHR11255
PANTHER:PTHR11255:SF56	MetaCyc:PWY-7039	MetaCyc:PWY-7817	SMART:SM00045	SMART:SM00046	SUPFAM:SSF111331
UniParc:UPI0002339A50	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:29792209..29817380

Molecular Weight (calculated)

53752.8 Da

IEP (calculated)

7.199

GRAVY (calculated)

-0.276

Length

480 amino acids

Sequence
(BLAST)

001: MDPPSSSTMV PIKSSSSIVE SLRGCGISGG TRVDKEELRK KLTMPKYLRF AMRDSIRFKD PAAGESRCIH SKDDHNAVAP STPMVVFINP RSGGRHGPFL
101: KERLQHLMSE EQVLDMLDVK PHEFLRYGLG CLEMLASLGD YCAKETRERI RIMVAGGDGS VGWVLGCLTE LHAQGREPIP PVGIVPLGTG NDLSRSLGWG
201: GSFPFSWKTA IKRSLYKASI GPICHLDSWR LSLSMPEGTI IEPPHSLKHT TEFTLDEGLE VERELSENVI CYEGVFYNYF SIGMDAQVAY GFHHLRNEKP
301: YLAQGPIANK IIYSGYSCTQ GWFFTPCTSD PGLRGLKNIL RMHVKKINCS EWEQVLVPTS VRAIVALNLH SYGSGRNPWG NLTPEYLEKR GFIEAQFDDG
401: LLEIFGLKQG WHATFVMSEL ISAKHIAQAT AIRLEVRGGE WKDAFMQMDG EPWKQPMSKD FSTFVEIKRE PFQSIMINGE

Best Arabidopsis Sequence Match ( AT2G18730.1 )
(BLAST)

001: MDSPVSKTDA SKEKFVASRP STADSKTMRG CGLANLAWVG VDKVELRQRL MMPEYLRLAM RDCIKRKDSS AIPDHLLLPG GAVADMAPHA PMVVFINPNS
101: GGRHGPVLKE RLQQLMSEEQ VFDLTEVKPH EFVRYGLGCL EKVAAEGDEC AKECRARLRI MVAGGDGTVG WVLGCLGELN KDGKSQIPPV GVIPLGTGND
201: LSRSFGWGGS FPFAWRSAVK RTLHRASMGP VARLDSWKIL VSMPSGEVVD PPYSLKPAEE NELDQGLDAG IDAPPLAKAY EGVFYNYLSI GMDAQVAYGF
301: HHLRNTKPYL AQGPISNKII YSSFGCSQGW FCTPCVNDPG LRGLRNIMKI HIKKVNCSQW EEIAVPKNVR SIVALNLHSY GSGSHPWGNL KPDYLEKRGF
401: VEAHCDDGLI EIFGFKQGWH ASFVMAELIS AKHIAQAAAV RFELRGGDWR DAFLQMDGEP WKQPMSTEYS TFVEIKKVPY QSLMINNE

Arabidopsis Description

DGK3Diacylglycerol kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZG1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.