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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
 plasma membrane: 18260611
plasma membrane: 18557835
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI

Inferred distinct locusB in Crop

locusBlocations
Os06t0154500-01
Os11t0636900-02

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G18730.1 Os06t0154500-01 AT2G43790.1 21798944
AT2G18730.1 Os11t0636900-02 AT4G36690.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07651 Sorghum plastid 87.3 86.59
Zm00001d018333_P001 Maize plasma membrane 86.89 86.18
TraesCS6B01G381300.2 Wheat cytosol 85.04 82.67
HORVU6Hr1G083620.21 Barley mitochondrion 65.57 82.47
TraesCS6D01G330800.1 Wheat cytosol 84.02 81.35
TraesCS6A01G347800.3 Wheat cytosol, plastid 82.38 81.05
PGSC0003DMT400018811 Potato cytosol 29.92 73.37
GSMUA_Achr10P... Banana cytosol 18.03 69.29
Solyc07g006580.2.1 Tomato cytosol 61.27 61.52
Solyc06g009270.2.1 Tomato nucleus 60.45 61.33
KRH54995 Soybean cytosol, plastid 60.25 61.25
KRH62935 Soybean cytosol 60.04 60.41
GSMUA_Achr7P16340_001 Banana cytosol 59.22 60.21
CDY13009 Canola cytosol 59.43 60.17
KRH02925 Soybean cytosol 59.02 60.0
Bra038816.1-P Field mustard cytosol 59.22 59.96
KRH18970 Soybean cytosol 58.81 59.79
VIT_11s0052g01840.t01 Wine grape cytosol, plastid 62.7 59.77
CDY49312 Canola cytosol 59.02 59.75
CDY28179 Canola cytosol 60.04 59.67
Bra011184.1-P Field mustard cytosol 60.04 59.67
CDX68647 Canola cytosol 59.84 59.59
CDY51490 Canola cytosol 58.4 59.5
AT4G30340.1 Thale cress cytosol 59.84 59.35
CDY30304 Canola cytosol 57.79 58.87
AT2G18730.1 Thale cress cytosol 58.81 58.81
Bra038549.1-P Field mustard cytosol 57.58 58.66
CDX88634 Canola plastid 57.79 58.51
Bra006807.1-P Field mustard plastid 57.79 58.51
AT5G57690.1 Thale cress cytosol, plastid 57.58 57.7
CDY68130 Canola plastid 53.07 57.56
GSMUA_Achr10P... Banana cytosol 45.49 57.51
GSMUA_Achr6P03930_001 Banana cytosol 14.96 56.15
GSMUA_Achr6P03940_001 Banana cytosol 21.72 45.89
Os04t0634700-01 Rice plasma membrane 30.53 29.86
Os01t0783200-02 Rice cytosol 29.71 29.77
Os08t0178700-01 Rice plasma membrane 30.33 29.48
Os12t0224000-01 Rice cytosol 11.89 27.36
Os03t0425300-01 Rice endoplasmic reticulum, golgi, nucleus 5.33 6.15
Protein Annotations
KEGG:00561+2.7.1.107KEGG:00564+2.7.1.107KEGG:04070+2.7.1.107Gene3D:2.60.200.40Gene3D:3.40.50.10330EntrezGene:4330961
MapMan:5.2.1.4InterPro:ATP-NAD_kinase_NProteinID:BAD19858.1ProteinID:BAF10259.1ProteinID:BAS81290.1InterPro:DGK
InterPro:Diacylglycerol_kin_accessoryInterPro:Diacylglycerol_kinase_cat_domInterPro:Diacylglycerol_kinase_plnGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003824GO:GO:0003951GO:GO:0004143GO:GO:0004518GO:GO:0004519
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006139
GO:GO:0007154GO:GO:0007165GO:GO:0007205GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0009451GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016787
GO:GO:0043231GO:GO:0090305InterPro:IPR001206InterPro:IPR017438InterPro:NAD/diacylglycerol_kinase_sfEnsemblPlantsGene:Os02g0787800
EnsemblPlants:Os02t0787800-01PFAM:PF00609PFAM:PF00781PIRSF:PIRSF030829PFscan:PS50146PANTHER:PTHR11255
PANTHER:PTHR11255:SF56UniProt:Q6K4P5SMART:SM00045SMART:SM00046SUPFAM:SSF111331UniParc:UPI000037599D
RefSeq:XP_015626235.1RefSeq:XP_015626236.1SEG:seg:::
Description
Diacylglycerol kinase accessory region domain containing protein. (Os02t0787800-01)
Coordinates
chr2:-:33476467..33483947
Molecular Weight (calculated)
53980.8 Da
IEP (calculated)
6.704
GRAVY (calculated)
-0.239
Length
488 amino acids
Sequence
(BLAST)
001: MERAEETPRA PSTAPSARVS IWESVRACGV WGKEVDKAEL RRQVVMPLYA RRAVAAAVKA KDEAVGVAAA AERGEEGEVE VEVEAAVTPV VVFVNSRSGG
101: RHGPELKVRL HELISEEQVF DLSVVKPSDF INYGLGCLEK LAEQGDNCAE TIRKKLRIMV AGGDGTVGWV LGCLTDLYRL KREPVPPTGI IPLGTGNDLA
201: RSFGWGGSFP FGWRSAVKRY LSKAATAPTC SLDSWQAVVM MPDGEIKELP YALKKTEPAD CLELCQENGT ELPEKASCYK GVFYNYLSIG MDAQVAYGFH
301: HLRDEKPYLA QGPVANKLIY AGYSCTQGWF CTPCTASPQL RGLKNILRLY IKKVNCSEWE QVTMPSSVRS LVVLNLYNYG SGRHPWGDLK PDYLEKKGFV
401: EAHSDDGLLE IFGLKEGWHA SFVMAELIKA KHIAQAAAIK FEMRGGQWNR AYVQMDGEPW KQPLLQEQST IIEINKVPYP SLMINGEQ
Best Arabidopsis Sequence Match ( AT4G30340.1 )
(BLAST)
001: MEETPRSVGE ASTTNFVAAR PSAKTDDAVT MRGCGFANLA LVGIDKEELR GRLAMPEYLR IAMRDCIKRK DSTEISDHLL LPGGAAADMA PHAPMVVFIN
101: PKSGGRHGPV LKERLQQLMT EEQVFDLTEV KPHEFVRYGL GCLDTLAAKG DECARECREK IRIMVAGGDG TVGWVLGCLG ELHKDGKSHI PPVGVIPLGT
201: GNDLSRSFSW GGSFPFAWRS AMKRTLHRAT LGSIARLDSW KIVVSMPSGE VVDPPYSLKP TIEETALDQA LDADGDVPPK AKSYEGVFYN YFSIGMDAQV
301: AYGFHHLRNE KPYLAQGPVT NKIIYSSYSC TQGWFCTPCV NNPALRGLRN IMKIHIKKAN CSEWEEIHVP KSVRSIVVLN LYNYGSGRHP WGNLRPKYLE
401: KRGFVEAHCD DGLIEIFGLK QGWHASFVMA EIISAKHIAQ AAAIRFELRG GDWKNAFLQM DGEPWKQPMK SDYSTFVEIK KVPFQSLMIN GE
Arabidopsis Description
DGK7Diacylglycerol kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:F4JQ95]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.