Factsheet for VIT_09s0018g01820.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0012g00530.t01
VIT_03s0017g00210.t01
VIT_03s0038g04360.t01
VIT_05s0094g00900.t01
VIT_06s0004g03540.t01
VIT_16s0115g00130.t01
VIT_19s0027g01340.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	VIT_02s0012g00530.t01	AT1G32380.1	21798944
AT1G51660.1	VIT_03s0038g04360.t01	AT1G71230.1	21798944
AT1G51660.1	VIT_05s0094g00900.t01	AT2G43790.1	19513235
AT1G51660.1	VIT_05s0094g00900.t01	AT2G43790.1	21798944
AT1G51660.1	VIT_03s0017g00210.t01	AT3G08530.1	21798944
AT1G51660.1	VIT_16s0115g00130.t01	AT3G08530.1	21798944
AT1G51660.1	VIT_19s0027g01340.t01	AT3G08530.1	21798944
AT1G51660.1	VIT_06s0004g03540.t01	AT3G45640.1	19513235
AT1G51660.1	VIT_06s0004g03540.t01	AT3G45640.1	21798944
AT3G21220.1	VIT_05s0094g00900.t01	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32415	Canola	cytosol, plastid	42.86	75.31
Solyc03g123800.1.1	Tomato	nucleus	63.57	74.37
Bra001818.1-P	Field mustard	plastid	58.33	74.24
PGSC0003DMT400023739	Potato	plastid	65.24	74.05
CDY27532	Canola	cytosol, plastid	57.38	73.7
CDX82209	Canola	plastid	57.62	73.33
AT3G21220.1	Thale cress	cytosol, plastid	60.48	72.99
Bra023894.1-P	Field mustard	cytosol, plastid	57.14	72.51
CDY37306	Canola	cytosol, plastid	57.14	72.51
CDX82210	Canola	plastid	52.14	71.57
CDX87830	Canola	cytosol	36.43	71.16
CDY46547	Canola	cytosol, plastid	60.0	70.99
Bra014295.1-P	Field mustard	cytosol, plastid	60.0	70.99
CDY52951	Canola	cytosol	59.52	70.22
HORVU7Hr1G031720.2	Barley	cytosol	44.52	70.04
CDY43920	Canola	cytosol, plastid	56.19	70.03
Bra030430.1-P	Field mustard	cytosol, plastid	56.19	70.03
KRH47006	Soybean	cytosol, plastid	58.33	69.8
AT1G51660.1	Thale cress	plastid	60.48	69.4
GSMUA_Achr9P13590_001	Banana	mitochondrion	38.81	69.36
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	53.33	67.47
KRH44646	Soybean	cytosol, plastid	58.33	67.31
TraesCS7B01G059000.1	Wheat	plastid	52.62	64.06
KXG19514	Sorghum	plastid	52.62	63.69
TraesCS7D01G155100.1	Wheat	plastid	52.86	63.61
TraesCS7A01G154900.1	Wheat	plastid	52.86	63.61
Os06t0191300-01	Rice	plasma membrane	51.67	63.45
Zm00001d045064_P001	Maize	extracellular, plasma membrane	52.38	63.4
OQU83236	Sorghum	cytosol	19.05	62.99
GSMUA_Achr9P22810_001	Banana	cytosol	19.05	62.5
CDY32414	Canola	extracellular, plasma membrane	53.81	62.43
Zm00001d018326_P001	Maize	plastid	52.38	61.8
Os02t0787300-01	Rice	plasma membrane	53.81	61.25
HORVU5Hr1G067100.2	Barley	cytosol	33.81	61.21
OQU85840	Sorghum	plastid	53.81	60.75
Zm00001d052066_P001	Maize	plastid	52.62	60.71
TraesCS6D01G328800.1	Wheat	cytosol, plastid	52.38	59.78
TraesCS6B01G379500.1	Wheat	cytosol, plastid	52.38	59.14
Bra001817.1-P	Field mustard	cytosol	53.1	58.84
HORVU0Hr1G038850.2	Barley	cytosol	38.57	54.92
GSMUA_Achr3P05000_001	Banana	plastid	55.71	51.54
VIT_17s0000g01970.t01	Wine grape	cytosol	36.9	49.36
Os06t0191500-01	Rice	cytosol, plastid	33.1	45.42
VIT_11s0016g01770.t01	Wine grape	cytosol, nucleus, plasma membrane	30.48	36.16
VIT_11s0016g02970.t01	Wine grape	cytosol	29.05	34.46
VIT_14s0066g00670.t01	Wine grape	cytosol	28.57	23.17
VIT_01s0127g00690.t01	Wine grape	cytosol	18.57	19.9
VIT_05s0049g00060.t01	Wine grape	cytosol	20.24	15.65
VIT_09s0018g01390.t01	Wine grape	cytosol	21.19	15.16
VIT_14s0066g01170.t01	Wine grape	cytosol	20.48	12.99
VIT_19s0014g02310.t01	Wine grape	cytosol	21.43	12.75
VIT_01s0011g00300.t01	Wine grape	cytosol	24.76	12.52
VIT_02s0025g02480.t01	Wine grape	cytosol	20.71	11.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100258699	wikigene:100258699	MapMan:18.4.2.1	Gene3D:3.30.200.20	ProteinID:CCB49727
ProteinID:CCB49727.1	UniProt:F6HBZ4	EMBL:FN595513	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049
GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100258699	wikigene:LOC100258699	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002109AF2	ArrayExpress:VIT_09s0018g01820	EnsemblPlantsGene:VIT_09s0018g01820
EnsemblPlants:VIT_09s0018g01820.t01	RefSeq:XP_002273313	RefSeq:XP_002273313.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:19257820..19263704

Molecular Weight (calculated)

46810.4 Da

IEP (calculated)

9.750

GRAVY (calculated)

-0.337

Length

420 amino acids

Sequence
(BLAST)

001: MKPNQPPTAA ASSSAANTRI RPRRRPDLTL PLPQRDPSLA VPLPLPPTSA QSSSSGGAAA AATPAFSELE RINRIGSGSG GTVYKVLHRP TGRLYALKVI
101: YGNHDDDVLR QICREIEILR DVDNPNVVKC HDMYDHAGEI QVLLEHMDGG SLEGTHIADE LALSDLAFQI LSGLHYLHRR KIVHRDIKPS NLLINARRQV
201: KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNHG RYDGYAGDIW SLGVSILEFY LGRFPFAVGR QGDWASLMCA ICMSQPPEAP VTASREFRDF
301: ISRCLQRDPA VRWSADKLLR HPFVLQSQRR RGQSQSQVHH PPQLLPPPRL HSSTRPTGSV RVQAYESMSS PDGVLPGQRK IVFHDCPHLS LFLYKLILFF
401: PLKGQKANHR MLHMGMREIQ

Best Arabidopsis Sequence Match ( AT3G21220.2 )
(BLAST)

001: MKPIQSPSGV ASPMKNRLRK RPDLSLPLPH RDVALAVPLP LPPPSSSSSA PASSSAISTN ISAAKSLSEL ERVNRIGSGA GGTVYKVIHT PTSRPFALKV
101: IYGNHEDTVR RQICREIEIL RSVDHPNVVK CHDMFDHNGE IQVLLEFMDQ GSLEGAHIWQ EQELADLSRQ ILSGLAYLHR RHIVHRDIKP SNLLINSAKN
201: VKIADFGVSR ILAQTMDPCN SSVGTIAYMS PERINTDLNH GRYDGYAGDV WSLGVSILEF YLGRFPFAVS RQGDWASLMC AICMSQPPEA PATASQEFRH
301: FVSCCLQSDP PKRWSAQQLL QHPFILKATG GPNLRQMLPP PRPLPSAS

Arabidopsis Description

MKK5MKK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VIK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.