Factsheet for VIT_11s0016g01770.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000744	Potato	cytosol	76.27	75.63
Solyc12g009020.1.1	Tomato	cytosol	75.99	75.35
KRH02666	Soybean	cytosol	75.14	74.72
KRH19241	Soybean	cytosol, nucleus	74.86	74.44
KRH37444	Soybean	cytosol	32.49	74.19
GSMUA_Achr7P09660_001	Banana	cytosol	71.75	72.57
TraesCS4A01G396700.2	Wheat	cytosol	60.45	72.05
GSMUA_Achr10P...	Banana	cytosol	69.77	70.77
OQU75818	Sorghum	cytosol	69.21	70.2
Os06t0147800-01	Rice	cytosol	69.49	69.89
KRH12458	Soybean	cytosol	70.62	69.64
TraesCS7A01G096800.1	Wheat	cytosol	68.64	69.23
TraesCS7D01G092900.1	Wheat	cytosol	68.08	69.05
CDX68588	Canola	cytosol	70.9	68.96
Bra011137.1-P	Field mustard	cytosol	70.62	68.68
AT4G26070.2	Thale cress	cytosol	68.36	68.36
AT4G29810.2	Thale cress	cytosol	71.75	68.28
CDY43527	Canola	cytosol	70.06	68.13
Zm00001d045359_P002	Maize	cytosol	68.08	67.7
CDX92751	Canola	cytosol	66.67	66.86
CDY42757	Canola	cytosol	66.38	66.2
Bra019122.1-P	Field mustard	cytosol	66.38	66.2
VIT_11s0016g02970.t01	Wine grape	cytosol	61.58	61.58
GSMUA_Achr10P...	Banana	plastid	68.36	57.21
Os11t0226100-00	Rice	cytosol	32.77	53.95
VIT_17s0000g01970.t01	Wine grape	cytosol	35.59	40.13
VIT_09s0018g01820.t01	Wine grape	plastid	36.16	30.48
VIT_14s0066g00670.t01	Wine grape	cytosol	38.7	26.45
HORVU6Hr1G013290.31	Barley	cytosol	64.41	24.68
VIT_01s0127g00690.t01	Wine grape	cytosol	24.29	21.94
VIT_09s0018g01390.t01	Wine grape	cytosol	26.84	16.18
VIT_05s0049g00060.t01	Wine grape	cytosol	22.6	14.73
VIT_14s0066g01170.t01	Wine grape	cytosol	25.14	13.44
VIT_19s0014g02310.t01	Wine grape	cytosol	26.55	13.31
VIT_01s0011g00300.t01	Wine grape	cytosol	29.38	12.52
VIT_02s0025g02480.t01	Wine grape	cytosol	24.29	11.8

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100247508	wikigene:100247508	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20
ProteinID:CBI27870	ProteinID:CBI27870.3	UniProt:D7TCL2	EMBL:FN595756	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098
GO:GO:0032147	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100247508	wikigene:LOC100247508	PFAM:PF00069
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TIGR:TC55447	TIGR:TC62930	UniParc:UPI00001D8984	ArrayExpress:VIT_11s0016g01770	EnsemblPlantsGene:VIT_11s0016g01770
EnsemblPlants:VIT_11s0016g01770.t01	unigene:Vvi.24321	RefSeq:XP_002280877	RefSeq:XP_002280877.1	RefSeq:XP_010656161.1	:

Description

No Description!

Coordinates

chr11:+:1417490..1424368

Molecular Weight (calculated)

39155.9 Da

IEP (calculated)

6.417

GRAVY (calculated)

-0.153

Length

354 amino acids

Sequence
(BLAST)

001: MRRGPLNPSN LKLTLPPDED SLTKFLTQSG TFMDGDLLVN RDGVRIVSKS EAEVPPLIKP SDNQLSLADI DTIKVIGKGA GGTVQLVQHK WTGQFFALKV
101: IQMNIQEAAL KHIAQELKIN QSSQCPYVVV CYKSFYDNGA FSIILEYMDG GSLLDFLKKV KSIPEPYLAA ICNQVLKGLS YLHHERHIIH RDLKPSNLLI
201: NHRGEVKITD FGVSAILTST SGQANTFVGT YNYMSPERIS GGKYGSKSDI WSLGLVLLEC ATGQFPYSPP EQGEGWTSFY ELMEAIVDQP PPCASTNQFS
301: AEFCSFISAC IQKDPNDRKS AHELMAHPFI SMYRDLNVDL ATYFTNAGSP LATF

Best Arabidopsis Sequence Match ( AT4G29810.1 )
(BLAST)

001: MKKGGFSNNL KLAIPVAGEQ SITKFLTQSG TFKDGDLRVN KDGVRIISQL EPEVLSPIKP ADDQLSLSDL DMVKVIGKGS SGVVQLVQHK WTGQFFALKV
101: IQLNIDEAIR KAIAQELKIN QSSQCPNLVT SYQSFYDNGA ISLILEYMDG GSLADFLKSV KAIPDSYLSA IFRQVLQGLI YLHHDRHIIH RDLKPSNLLI
201: NHRGEVKITD FGVSTVMTNT AGLANTFVGT YNYMSPERIV GNKYGNKSDI WSLGLVVLEC ATGKFPYAPP NQEETWTSVF ELMEAIVDQP PPALPSGNFS
301: PELSSFISTC LQKDPNSRSS AKELMEHPFL NKYDYSGINL ASYFTDAGSP LATLGNLSGT FSV

Arabidopsis Description

ATMKK2MAP kinase kinase 2 [Source:TAIR;Acc:AT4G29810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.