CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79176
CDX79801
CDX83459
CDX86029
CDX91876
CDX93837
CDX99153
CDY01279
CDY07174
CDY17911
CDY32299
CDY44256
CDY48504
CDY67475
CDY68772

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	CDX93837	AT1G32380.1	21798944
AT1G51660.1	CDY01279	AT1G32380.1	21798944
AT1G51660.1	CDY32299	AT1G32380.1	21798944
AT1G51660.1	CDY68772	AT1G32380.1	21798944
AT1G51660.1	CDX79801	AT2G43790.1	19513235
AT1G51660.1	CDX83459	AT2G43790.1	19513235
AT1G51660.1	CDY17911	AT2G43790.1	19513235
AT1G51660.1	CDY44256	AT2G43790.1	19513235
AT1G51660.1	CDX79801	AT2G43790.1	21798944
AT1G51660.1	CDX83459	AT2G43790.1	21798944
AT1G51660.1	CDY17911	AT2G43790.1	21798944
AT1G51660.1	CDY44256	AT2G43790.1	21798944
AT1G51660.1	CDX86029	AT3G45640.1	19513235
AT1G51660.1	CDX99153	AT3G45640.1	19513235
AT1G51660.1	CDX86029	AT3G45640.1	21798944
AT1G51660.1	CDX99153	AT3G45640.1	21798944
AT1G51660.1	CDX79176	AT4G01090.1	21798944
AT1G51660.1	CDX91876	AT4G01090.1	21798944
AT1G51660.1	CDY07174	AT4G01090.1	21798944
AT1G51660.1	CDY48504	AT4G01090.1	21798944
AT1G51660.1	CDY67475	AT4G01090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014295.1-P	Field mustard	cytosol, plastid	99.44	99.44
CDY52951	Canola	cytosol	95.77	95.51
AT1G51660.1	Thale cress	plastid	85.92	83.33
CDX87830	Canola	cytosol	50.14	82.79
CDY43920	Canola	cytosol, plastid	76.62	80.71
CDY32415	Canola	cytosol, plastid	52.68	78.24
CDY27532	Canola	cytosol, plastid	70.7	76.76
CDX82209	Canola	plastid	70.99	76.36
CDY37306	Canola	cytosol, plastid	70.99	76.13
CDX82210	Canola	plastid	64.23	74.51
Solyc03g123800.1.1	Tomato	nucleus	70.42	69.64
KRH47006	Soybean	cytosol, plastid	68.73	69.52
PGSC0003DMT400023739	Potato	plastid	72.39	69.46
HORVU7Hr1G031720.2	Barley	cytosol	52.11	69.29
KRH44646	Soybean	cytosol, plastid	68.73	67.03
OQU83236	Sorghum	cytosol	23.94	66.93
GSMUA_Achr9P13590_001	Banana	mitochondrion	44.23	66.81
GSMUA_Achr9P22810_001	Banana	cytosol	23.66	65.62
CDY32414	Canola	extracellular, plasma membrane	64.51	63.26
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	59.15	63.25
TraesCS7B01G059000.1	Wheat	plastid	60.56	62.32
KXG19514	Sorghum	plastid	60.56	61.96
TraesCS7A01G154900.1	Wheat	plastid	60.85	61.89
TraesCS7D01G155100.1	Wheat	plastid	60.85	61.89
Os06t0191300-01	Rice	plasma membrane	59.44	61.7
Zm00001d045064_P001	Maize	extracellular, plasma membrane	60.0	61.38
Zm00001d018326_P001	Maize	plastid	60.85	60.67
VIT_09s0018g01820.t01	Wine grape	plastid	70.99	60.0
Os02t0787300-01	Rice	plasma membrane	62.25	59.89
Zm00001d052066_P001	Maize	plastid	61.13	59.62
TraesCS6D01G328800.1	Wheat	cytosol, plastid	61.41	59.24
OQU85840	Sorghum	plastid	61.97	59.14
TraesCS6B01G379500.1	Wheat	cytosol, plastid	61.97	59.14
HORVU5Hr1G067100.2	Barley	cytosol	38.59	59.05
HORVU0Hr1G038850.2	Barley	cytosol	44.79	53.9
GSMUA_Achr3P05000_001	Banana	plastid	63.38	49.56
CDY71921	Canola	mitochondrion	42.25	49.02
CDX82067	Canola	mitochondrion	41.97	48.69
CDY11103	Canola	mitochondrion	41.41	47.88
CDX68224	Canola	mitochondrion	41.41	47.73
CDY05240	Canola	mitochondrion	39.15	43.85
Os06t0191500-01	Rice	cytosol, plastid	37.75	43.79
CDY24712	Canola	mitochondrion	38.87	43.53
CDX93844	Canola	cytosol	26.48	38.52
CDY32868	Canola	cytosol	26.76	37.11
CDY01289	Canola	cytosol	18.31	36.93
CDX88578	Canola	cytosol	34.93	34.64
CDY11913	Canola	cytosol	34.93	34.64
CDX92751	Canola	cytosol	34.37	34.56
CDY64969	Canola	cytosol	32.39	34.53
CDY42757	Canola	cytosol	34.37	34.37
CDX68588	Canola	cytosol	33.8	32.97
CDY43527	Canola	cytosol	33.52	32.69
CDY39283	Canola	plasma membrane, vacuole	31.83	32.01
CDX78589	Canola	mitochondrion	18.03	28.32
CDY70105	Canola	cytosol	22.82	26.47
CDX70576	Canola	cytosol	12.96	24.34
CDY50119	Canola	cytosol	33.8	23.17
CDY42585	Canola	cytosol	33.8	23.17
CDY40903	Canola	cytosol	29.58	19.37
CDY62124	Canola	cytosol	23.38	17.22
CDY47150	Canola	cytosol	23.38	17.18
CDY69326	Canola	cytosol	23.38	17.18
CDY11594	Canola	cytosol	23.94	15.21
CDY57851	Canola	cytosol	23.94	14.26
CDY09438	Canola	cytosol	23.66	13.95
CDX95954	Canola	cytosol	30.14	13.81
CDY54149	Canola	cytosol	30.7	13.78
CDY03750	Canola	cytosol	23.38	13.76
CDY50304	Canola	cytosol	30.7	13.46
CDY09880	Canola	cytosol	24.23	12.76
CDX86848	Canola	mitochondrion	24.23	12.76
CDY25260	Canola	cytosol	23.66	12.73
CDX94250	Canola	cytosol	23.66	12.65
CDY53517	Canola	mitochondrion	24.23	12.65
CDX69563	Canola	cytosol	23.94	12.63
CDX91026	Canola	cytosol	23.1	12.6
CDX85586	Canola	cytosol	23.1	12.6
CDY45937	Canola	cytosol	23.38	12.13
CDX97641	Canola	cytosol	23.1	12.13
CDX98536	Canola	cytosol	23.1	12.13
CDX67984	Canola	cytosol	22.82	11.89
CDY03490	Canola	mitochondrion	23.66	11.81
CDX76327	Canola	mitochondrion	23.66	11.7
CDX88555	Canola	cytosol	22.82	11.69
CDX79332	Canola	cytosol	22.82	11.57
CDX87368	Canola	cytosol	22.82	11.49
CDX73633	Canola	cytosol	6.76	10.91
CDY25875	Canola	plastid	23.38	10.64
CDY25732	Canola	plastid	10.42	6.75
CDY70962	Canola	cytosol	5.63	5.48
CDY40902	Canola	nucleus	0.56	0.81
CDX76326	Canola	plastid	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078I913	UniProt:A0A078I913	EnsemblPlants:CDY46547
ProteinID:CDY46547	ProteinID:CDY46547.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00085763001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE9B6F	SEG:seg	:	:

Description

BnaA08g01860DBnaA08g01860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I913]

Coordinates

chrLK032675:-:88787..90210

Molecular Weight (calculated)

39323.8 Da

IEP (calculated)

9.412

GRAVY (calculated)

-0.484

Length

355 amino acids

Sequence
(BLAST)

001: MKPVQSAPVK SRPRRRPDLS LPLPQRDVSL AVPLPLPPTS SGSSSSSSAP SSTGSSAPKN YSDLERGNRI GSGAGGTVYK VTHRPTSREY ALKVIYGNHE
101: ENVRRQICRE IEILRDVNHQ NIVKCHEMFD QNGEIQVLLE FMDGGSLENR HVSNERDLAH LSHQILNGLA YLHGRHIVHR DIKPSNLLIN SDKIVKIADF
201: GVSRILAQTM DPCNSSVGTI AYMSPERINT DLNQGRYDGY AGDIWSLGVS ILEFYLGRFP FNVSRQGDWA SLMCAICMSQ PPEAPATASP DFRNFISCCL
301: RREPARRMTA TQLLQHPFIR RAVGQGQNRS PQNLHQLLPP PPPRTLSSSS SSPTT

Best Arabidopsis Sequence Match ( AT1G51660.1 )
(BLAST)

001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT

Arabidopsis Description

MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.