Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G32320.1 | CDX77826 | AT2G01450.1 | 19513235 |
| AT1G32320.1 | CDY17674 | AT2G01450.1 | 19513235 |
| AT1G32320.1 | CDY40377 | AT2G01450.1 | 19513235 |
| AT1G32320.1 | CDY41084 | AT2G01450.1 | 19513235 |
| AT1G32320.1 | CDY63829 | AT2G01450.1 | 19513235 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93844 | Canola | cytosol | 89.2 | 64.34 |
| Bra023257.1-P | Field mustard | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 88.64 | 50.65 |
| AT1G32320.1 | Thale cress | mitochondrion, peroxisome, plasma membrane, plastid | 70.45 | 40.66 |
| CDY32415 | Canola | cytosol, plastid | 34.09 | 25.1 |
| KRH74386 | Soybean | cytosol, mitochondrion | 46.02 | 24.04 |
| CDY71921 | Canola | mitochondrion | 39.77 | 22.88 |
| CDX82067 | Canola | mitochondrion | 39.77 | 22.88 |
| CDY11103 | Canola | mitochondrion | 38.07 | 21.82 |
| CDX68224 | Canola | mitochondrion | 38.07 | 21.75 |
| CDY24712 | Canola | mitochondrion | 35.23 | 19.56 |
| CDY05240 | Canola | mitochondrion | 35.23 | 19.56 |
| KXG30961 | Sorghum | mitochondrion | 39.77 | 19.23 |
| CDY37306 | Canola | cytosol, plastid | 35.23 | 18.73 |
| CDY27532 | Canola | cytosol, plastid | 34.66 | 18.65 |
| CDX82210 | Canola | plastid | 32.39 | 18.63 |
| Zm00001d017693_P001 | Maize | mitochondrion | 39.2 | 18.4 |
| CDY46547 | Canola | cytosol, plastid | 36.93 | 18.31 |
| CDY43920 | Canola | cytosol, plastid | 34.66 | 18.1 |
| CDY52951 | Canola | cytosol | 36.36 | 17.98 |
| CDX82209 | Canola | plastid | 33.52 | 17.88 |
| Os02t0694900-00 | Rice | mitochondrion | 38.64 | 16.79 |
| CDY32414 | Canola | extracellular, plasma membrane | 34.09 | 16.57 |
| CDY64969 | Canola | cytosol | 28.41 | 15.02 |
| CDX88578 | Canola | cytosol | 27.84 | 13.69 |
| CDX92751 | Canola | cytosol | 27.27 | 13.6 |
| CDY42757 | Canola | cytosol | 27.27 | 13.52 |
| CDX87830 | Canola | cytosol | 16.48 | 13.49 |
| CDY11913 | Canola | cytosol | 27.27 | 13.41 |
| CDX78589 | Canola | mitochondrion | 17.05 | 13.27 |
| CDY39283 | Canola | plasma membrane, vacuole | 26.14 | 13.03 |
| CDX68588 | Canola | cytosol | 26.14 | 12.64 |
| CDY43527 | Canola | cytosol | 25.0 | 12.09 |
| CDX70576 | Canola | cytosol | 12.5 | 11.64 |
| CDY70105 | Canola | cytosol | 19.89 | 11.44 |
| CDY32868 | Canola | cytosol | 15.91 | 10.94 |
| CDY42585 | Canola | cytosol | 26.7 | 9.07 |
| CDY50119 | Canola | cytosol | 26.7 | 9.07 |
| CDY40903 | Canola | cytosol | 27.84 | 9.04 |
| CDY62124 | Canola | cytosol | 18.18 | 6.64 |
| CDY69326 | Canola | cytosol | 18.18 | 6.63 |
| CDY47150 | Canola | cytosol | 18.18 | 6.63 |
| CDY11594 | Canola | cytosol | 21.02 | 6.62 |
| CDX95954 | Canola | cytosol | 27.84 | 6.32 |
| CDY57851 | Canola | cytosol | 21.02 | 6.21 |
| CDY54149 | Canola | cytosol | 27.84 | 6.19 |
| CDY50304 | Canola | cytosol | 27.84 | 6.05 |
| CDY09438 | Canola | cytosol | 20.45 | 5.98 |
| CDY03750 | Canola | cytosol | 20.45 | 5.97 |
| CDX91026 | Canola | cytosol | 19.89 | 5.38 |
| CDX85586 | Canola | cytosol | 19.89 | 5.38 |
| CDX69563 | Canola | cytosol | 19.32 | 5.05 |
| CDY09880 | Canola | cytosol | 19.32 | 5.04 |
| CDX67984 | Canola | cytosol | 19.32 | 4.99 |
| CDX88555 | Canola | cytosol | 19.32 | 4.91 |
| CDX97641 | Canola | cytosol | 18.75 | 4.88 |
| CDX98536 | Canola | cytosol | 18.75 | 4.88 |
| CDX79332 | Canola | cytosol | 19.32 | 4.86 |
| CDY45937 | Canola | cytosol | 18.75 | 4.82 |
| CDX87368 | Canola | cytosol | 19.32 | 4.82 |
| CDY25260 | Canola | cytosol | 17.61 | 4.7 |
| CDX94250 | Canola | cytosol | 17.61 | 4.67 |
| CDY53517 | Canola | mitochondrion | 17.61 | 4.56 |
| CDX73633 | Canola | cytosol | 5.68 | 4.55 |
| CDX86848 | Canola | mitochondrion | 17.05 | 4.45 |
| CDY25875 | Canola | plastid | 19.32 | 4.36 |
| CDY03490 | Canola | mitochondrion | 16.48 | 4.08 |
| CDX76327 | Canola | mitochondrion | 16.48 | 4.04 |
| CDY25732 | Canola | plastid | 4.55 | 1.46 |
| CDY03491 | Canola | plastid | 0.57 | 0.32 |
| CDX76326 | Canola | plastid | 0.57 | 0.32 |
| CDY70962 | Canola | cytosol | 0.0 | 0.0 |
| CDY40902 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | MapMan:50.2.7 | GO:A0A078EKM4 | EnsemblPlants:CDY01289 | ProteinID:CDY01289 |
| ProteinID:CDY01289.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00111479001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PFscan:PS50011 | PANTHER:PTHR24361 | PANTHER:PTHR24361:SF325 | InterPro:Prot_kinase_dom | SUPFAM:SSF56112 |
| UniParc:UPI0004EE1631 | SEG:seg | : | : | : | : |
Description
BnaC05g24430D
Coordinates
chrLK031925:-:1090269..1092091
Molecular Weight (calculated)
19524.7 Da
IEP (calculated)
8.256
GRAVY (calculated)
-0.174
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVRERRHQ EPLTLPIPPP PHYHGIPGDP SPSSFSSSSP DSSSPVQTLN DLEKLTVLGE GSDGTVYKTR HRRTTALYAL KLIRSDLSIT TVEADTLKRI
101: ESSFIELLLA QHALPDPVIS TLANRILQGL RHLQEMRIVD GDIMPSNLLI NKKGEVKIAD FGASRILLLI QKWCLC
101: ESSFIELLLA QHALPDPVIS TLANRILQGL RHLQEMRIVD GDIMPSNLLI NKKGEVKIAD FGASRILLLI QKWCLC
001: MTLVRERRHQ EPLTLSIPPL IYHGTAFSVA SSSSSSPETS PIQTLNDLEK LSVLGQGSGG TVYKTRHRRT KTLYALKVLR PNLNTTVTVE ADILKRIESS
101: FIIKCYAVFV SLYDLCFVME LMEKGSLHDA LLAQQVFSEP MVSSLANRIL QGLRYLQKMG IVHGDIKPSN LLINKKGEVK IADFGASRIV AGGDYGSNGT
201: CAYMSPERVD LEKWGFGGEV GFAGDVWSLG VVVLECYIGR YPLTKVGDKP DWATLFCAIC CNEKVDIPVS CSLEFRDFVG RCLEKDWRKR DTVEELLRHS
301: FVKNR
101: FIIKCYAVFV SLYDLCFVME LMEKGSLHDA LLAQQVFSEP MVSSLANRIL QGLRYLQKMG IVHGDIKPSN LLINKKGEVK IADFGASRIV AGGDYGSNGT
201: CAYMSPERVD LEKWGFGGEV GFAGDVWSLG VVVLECYIGR YPLTKVGDKP DWATLFCAIC CNEKVDIPVS CSLEFRDFVG RCLEKDWRKR DTVEELLRHS
301: FVKNR
Arabidopsis Description
MKK10Mitogen-activated protein kinase kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM8]
SUBAcon: [mitochondrion,peroxisome,plastid,plasma membrane]
SUBAcon: [mitochondrion,peroxisome,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.