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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76326 Canola plastid 97.77 97.77
CDX78589 Canola mitochondrion 0.96 1.33
CDY03490 Canola mitochondrion 1.91 0.84
CDX76327 Canola mitochondrion 1.91 0.84
CDX86848 Canola mitochondrion 1.27 0.59
CDY53517 Canola mitochondrion 1.27 0.59
CDY01289 Canola cytosol 0.32 0.57
AT4G24100.4 Thale cress mitochondrion 1.27 0.55
CDX93844 Canola cytosol 0.32 0.41
CDY39283 Canola plasma membrane, vacuole 0.32 0.28
CDX92751 Canola cytosol 0.32 0.28
CDY42757 Canola cytosol 0.32 0.28
GSMUA_Achr8P11800_001 Banana mitochondrion 0.32 0.23
CDY25732 Canola plastid 0.32 0.18
TraesCS1A01G181900.1 Wheat cytosol, mitochondrion, nucleus 0.32 0.14
TraesCS1B01G199100.2 Wheat cytosol 0.32 0.14
VIT_02s0025g02480.t01 Wine grape cytosol 0.32 0.14
TraesCS1D01G185000.2 Wheat cytosol, mitochondrion, nucleus 0.32 0.14
HORVU1Hr1G048230.1 Barley cytosol 0.32 0.14
Zm00001d013836_P001 Maize mitochondrion 0.32 0.14
KXG38178 Sorghum cytosol 0.32 0.14
HORVU4Hr1G088910.1 Barley cytosol, mitochondrion 0.32 0.14
TraesCSU01G115300.1 Wheat mitochondrion 0.32 0.13
Os03t0114300-01 Rice mitochondrion 0.32 0.13
Os10t0518800-01 Rice plasma membrane 0.32 0.13
TraesCS5A01G556400.5 Wheat mitochondrion 0.32 0.13
TraesCS4B01G398400.3 Wheat mitochondrion 0.32 0.13
GSMUA_Achr11P... Banana cytosol 0.32 0.13
Zm00001d032440_P004 Maize mitochondrion 0.32 0.13
KXG40349 Sorghum mitochondrion 0.32 0.13
CDY25875 Canola plastid 0.32 0.13
Zm00001d027340_P001 Maize mitochondrion 0.32 0.13
CDX88555 Canola cytosol 0.0 0.0
CDX85586 Canola cytosol 0.0 0.0
KRH74639 Soybean extracellular, plasma membrane 0.0 0.0
KRH34259 Soybean cytosol 0.0 0.0
KRG92530 Soybean cytosol 0.0 0.0
CDX87368 Canola cytosol 0.0 0.0
CDX87830 Canola cytosol 0.0 0.0
CDX82209 Canola plastid 0.0 0.0
CDX88578 Canola cytosol 0.0 0.0
CDY71921 Canola mitochondrion 0.0 0.0
CDY70962 Canola cytosol 0.0 0.0
CDY70105 Canola cytosol 0.0 0.0
CDY69326 Canola cytosol 0.0 0.0
CDY64969 Canola cytosol 0.0 0.0
CDY62124 Canola cytosol 0.0 0.0
CDX82210 Canola plastid 0.0 0.0
CDY57851 Canola cytosol 0.0 0.0
PGSC0003DMT400031593 Potato nucleus 0.0 0.0
Solyc08g083040.2.1 Tomato cytosol 0.0 0.0
CDX82067 Canola mitochondrion 0.0 0.0
CDX79332 Canola cytosol 0.0 0.0
CDX73633 Canola cytosol 0.0 0.0
TraesCS4B01G395600.1 Wheat nucleus 0.0 0.0
CDX70576 Canola cytosol 0.0 0.0
CDX69563 Canola cytosol 0.0 0.0
TraesCS7A01G078200.1 Wheat nucleus 0.0 0.0
CDX68588 Canola cytosol 0.0 0.0
CDX68224 Canola mitochondrion 0.0 0.0
CDX67984 Canola cytosol 0.0 0.0
Bra013762.1-P Field mustard mitochondrion 0.0 0.0
CDX95954 Canola cytosol 0.0 0.0
CDY03750 Canola cytosol 0.0 0.0
CDY05240 Canola mitochondrion 0.0 0.0
CDY09438 Canola cytosol 0.0 0.0
CDY09880 Canola cytosol 0.0 0.0
CDY11103 Canola mitochondrion 0.0 0.0
CDY11594 Canola cytosol 0.0 0.0
CDY11913 Canola cytosol 0.0 0.0
CDY24712 Canola mitochondrion 0.0 0.0
CDY25260 Canola cytosol 0.0 0.0
CDX97641 Canola cytosol 0.0 0.0
CDY27532 Canola cytosol, plastid 0.0 0.0
CDY32414 Canola extracellular, plasma membrane 0.0 0.0
CDY32415 Canola cytosol, plastid 0.0 0.0
CDY32868 Canola cytosol 0.0 0.0
CDY37306 Canola cytosol, plastid 0.0 0.0
CDX98536 Canola cytosol 0.0 0.0
CDY40902 Canola nucleus 0.0 0.0
CDY40903 Canola cytosol 0.0 0.0
CDY42585 Canola cytosol 0.0 0.0
CDX94250 Canola cytosol 0.0 0.0
CDY43527 Canola cytosol 0.0 0.0
CDY43920 Canola cytosol, plastid 0.0 0.0
CDY45937 Canola cytosol 0.0 0.0
CDY46547 Canola cytosol, plastid 0.0 0.0
CDY47150 Canola cytosol 0.0 0.0
CDY50119 Canola cytosol 0.0 0.0
CDY50304 Canola cytosol 0.0 0.0
CDY52951 Canola cytosol 0.0 0.0
CDX91026 Canola cytosol 0.0 0.0
CDY54149 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY03491EnsemblPlantsGene:GSBRNA2T00116164001GO:A0A078EQL7ncoils:CoilPANTHER:PTHR36383ProteinID:CDY03491
ProteinID:CDY03491.1SEG:segTMHMM:TMhelixUniParc:UPI0004EF3933MapMan:35.2:
Description
BnaC01g15910D
Coordinates
chrLK031943:-:767609..769368
Molecular Weight (calculated)
34265.8 Da
IEP (calculated)
5.137
GRAVY (calculated)
-0.104
Length
314 amino acids
Sequence
(BLAST)
001: MQTLSPQSLR WKSNPLIVSE SYVFNPKALN FQLSSLSSPH RRTRNWRISS SPEENAANSS DGGDLKKSLS GIVGNQVEEL LSREENKSLL DGLEKASMRV
101: ETAKRELAEI ERQELEAKLL QDYVDKLESR AAEIAECQQE IVTARTMVEE AERSLSLAET AATKSSENGY SIDKDKERLE SAKAAAIAAA VGTVAEVPFA
201: LSQVSTIEQL VLPLGVAFAS CALFGVTFRY VIRRDLDDSH LKSGAVAAFG FVKGLGMLSR GPPLELSWES LFSHGIDGAV LVSQSVLIFA FASISLDFCF
301: KLKLLKPFPS SAQM
Best Arabidopsis Sequence Match ( AT4G24090.1 )
(BLAST)
001: MQSLSLQSLP WKPNSVTLPE INLLNPKQLT ASSSQYRRTR NWRIRSSSED NVAISSDGGD LKNSLSGIVG NQVEELLSRE ENKGLLDGLE KASLRVEIAK
101: RELEDIERQE IEAKLLQDYI NQLESRAAEI AECQQEIDAA RSMVEEAERS LSLADNSTIG SSEKGYSIDK DKERLESAKA AVIAAAVGTI AELPFALSQV
201: ASMEQLVLPL GIAFASCALF GVTFRYAVRR DLDDNHLKSG AVAAFGFVKG LGMLSRGPPL ELSWESLFSH GIDGAVLVSQ SVLIFAFASI GLDFCFKMKL
301: LRPFPSSD
Arabidopsis Description
At4g24090 [Source:UniProtKB/TrEMBL;Acc:Q5XEV6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.