CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74352
CDX79801
CDX83459
CDX91889
CDY17911
CDY44256

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56580.1	CDX79801	AT2G43790.1	19513235
AT5G56580.1	CDX83459	AT2G43790.1	19513235
AT5G56580.1	CDY17911	AT2G43790.1	19513235
AT5G56580.1	CDY44256	AT2G43790.1	19513235
AT5G56580.1	CDX74352	AT4G01370.1	19513235
AT5G56580.1	CDX91889	AT4G01370.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002806.1-P	Field mustard	cytosol	97.6	91.29
CDY11913	Canola	cytosol	93.99	87.43
AT5G56580.1	Thale cress	cytosol	93.39	87.36
CDX88578	Canola	cytosol	93.69	87.15
CDY39283	Canola	plasma membrane, vacuole	87.39	82.44
CDY32868	Canola	cytosol	62.76	81.64
KRH72031	Soybean	cytosol	82.88	77.97
KRH33212	Soybean	cytosol	82.88	77.53
Solyc03g119490.2.1	Tomato	cytosol, extracellular	82.28	77.4
PGSC0003DMT400014637	Potato	cytosol	82.28	77.4
VIT_11s0016g02970.t01	Wine grape	cytosol	81.68	76.84
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	64.26	68.81
Zm00001d043609_P001	Maize	cytosol, extracellular	69.67	65.35
TraesCS4B01G315300.1	Wheat	cytosol	69.37	65.07
TraesCS4D01G312300.3	Wheat	cytosol	69.07	64.79
TraesCS4A01G414600.1	Wheat	cytosol	69.07	64.79
EES03540	Sorghum	cytosol	69.07	64.79
Os01t0510100-01	Rice	cytosol, plasma membrane	69.07	64.79
CDX68588	Canola	cytosol	57.36	52.47
CDY43527	Canola	cytosol	56.46	51.65
CDX92751	Canola	cytosol	52.55	49.58
CDY42757	Canola	cytosol	52.55	49.3
CDX87830	Canola	cytosol	25.23	39.07
CDY11103	Canola	mitochondrion	34.83	37.78
CDX82210	Canola	plastid	34.53	37.58
CDX68224	Canola	mitochondrion	34.23	37.01
CDX82067	Canola	mitochondrion	33.93	36.93
CDY71921	Canola	mitochondrion	33.93	36.93
CDY32415	Canola	cytosol, plastid	26.13	36.4
CDY27532	Canola	cytosol, plastid	35.44	36.09
CDX82209	Canola	plastid	35.14	35.45
CDY37306	Canola	cytosol, plastid	35.14	35.35
CDY24712	Canola	mitochondrion	32.73	34.38
CDY05240	Canola	mitochondrion	32.43	34.07
CDY43920	Canola	cytosol, plastid	34.23	33.83
CDX93844	Canola	cytosol	24.32	33.2
CDY32414	Canola	extracellular, plasma membrane	35.74	32.87
CDY52951	Canola	cytosol	34.83	32.58
CDY46547	Canola	cytosol, plastid	34.53	32.39
CDX78589	Canola	mitochondrion	20.42	30.09
CDY01289	Canola	cytosol	15.02	28.41
CDY70105	Canola	cytosol	25.83	28.1
CDX70576	Canola	cytosol	14.71	25.93
CDY42585	Canola	cytosol	39.64	25.48
CDY50119	Canola	cytosol	39.34	25.29
CDY40903	Canola	cytosol	29.73	18.27
CDY62124	Canola	cytosol	24.62	17.01
CDY69326	Canola	cytosol	24.62	16.98
CDY47150	Canola	cytosol	24.62	16.98
CDY11594	Canola	cytosol	27.03	16.1
CDY57851	Canola	cytosol	27.03	15.1
CDY09438	Canola	cytosol	26.73	14.78
CDY03750	Canola	cytosol	26.73	14.76
CDX85586	Canola	cytosol	25.83	13.21
CDX91026	Canola	cytosol	25.83	13.21
CDX98536	Canola	cytosol	26.13	12.87
CDX97641	Canola	cytosol	26.13	12.87
CDX69563	Canola	cytosol	25.83	12.78
CDX95954	Canola	cytosol	29.73	12.77
CDY09880	Canola	cytosol	25.83	12.76
CDY45937	Canola	cytosol	25.83	12.57
CDX88555	Canola	cytosol	25.83	12.41
CDX67984	Canola	cytosol	25.23	12.33
CDY25260	Canola	cytosol	24.32	12.27
CDY54149	Canola	cytosol	29.13	12.26
CDY53517	Canola	mitochondrion	24.92	12.21
CDX94250	Canola	cytosol	24.32	12.2
CDX87368	Canola	cytosol	25.83	12.2
CDX86848	Canola	mitochondrion	24.62	12.17
CDX79332	Canola	cytosol	25.23	12.0
CDY50304	Canola	cytosol	28.83	11.85
CDY25875	Canola	plastid	25.83	11.03
CDY03490	Canola	mitochondrion	23.42	10.97
CDX76327	Canola	mitochondrion	23.42	10.86
CDX73633	Canola	cytosol	5.41	8.18
CDY25732	Canola	plastid	9.91	6.02
CDY70962	Canola	cytosol	3.6	3.29
CDX76326	Canola	plastid	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0
CDY40902	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078JE76	UniProt:A0A078JE76
EnsemblPlants:CDY64969	ProteinID:CDY64969	ProteinID:CDY64969.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00043945001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDCA40	SEG:seg	:

Description

BnaAnng19900DBnaAnng19900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE76]

Coordinates

chrLK034614:-:9132..11310

Molecular Weight (calculated)

37262.7 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.184

Length

333 amino acids

Sequence
(BLAST)

001: MKLKSNLKQL NKLSVPAQQT PISSFLTASG TFHDGDFLLN QKGLKLTSDD KQSRPSDSKE LDFEITAEDL EIVRVIGKGS GGVVQLVRHK WVGKLFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLVDVIRQ VKTILEPYLS VVCKQVLQGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVES PPPTAPSDQF
301: SPEFCSFITA CLQKDPPARA SSLDLLSLRV RDI

Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)

001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR

Arabidopsis Description

MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.